Vibrio diabolicus: AL552_07750
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Entry
AL552_07750 CDS
T05332
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vdb
Vibrio diabolicus
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vdb03400
]
AL552_07750
DNA repair and recombination proteins [BR:
vdb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AL552_07750
Archaeal homologous recombinant proteins
AL552_07750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_27
PUMA_CC
AAA_16
AAA_5
DUF6494
Crb2-like_BRCT-like
CpXC
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AVF93644
LinkDB
All DBs
Position
2:complement(1672082..1675138)
Genome browser
AA seq
1018 aa
AA seq
DB search
MKPIKLTMQAFGPFAKTEVIDFEKLGRNPLFLINGPTGSGKTSILDAICFALYGETTGNE
RQGIQMRCDLSAQDLPTEVVLEFSLHGKQYRVVRSPEQEAPKARGEGMTVKKHTAALYEL
GETEKLITSKTTQVKTEVSNIIGLNETQFRQVMVLPQGKFRELLLASSKEREEIFGQLFQ
TDIYKKIEYALKDKASAISKAKDEFDNQIRGALQVAGVSSEQELLHQLEQATEQLEVDRK
NEQASLDKLNVAKSELQKAETINGEFSKREQAENALKLHLEHSDSIKVRQQQLENAKNAN
KIELPYVSLQNAKTQTQELRQKIVALKESLDKANAVTKEKENLQQSAKEAAAKVPQLTQL
QYQLESMKDKLVEKANLERKITAGHQQKQQFEATLKQYIELKDKLAFQAQQGQKDLEQAR
VDVALVGSIDAEIKQKQRLLQDLQKLHGLTLELSKLTALTVSKQQPLQEASQRYMQCQQA
ADTIELKWHNAQAAVLAQRLKAGEACPVCGSQVHPNPATFVEEIVTKEQVQAARAKEREA
QASLNQLSNQQEQHNVVIIQHQNQIDQLKEELGEHAASEISTVQTGLQALNDQLLRLQSI
DIEKLEKNVEQLNQRCLVGENKIHELQNQMAANESTVQANQEQLTQLQASIDPKYSSVDA
LERDISLTKEQILTLNTGLEKAQNALQQAVLAQSNAESQLVTNKQWLSESEQKLSQAELA
WNEALQASKFEDESSYLNSRVTDDELQAWQKEIDNFKQTQTKLEQTLHDLNHALKALERP
DLDSLNDSLTTLQAQYIEVRNQLDTTRSTFERIEKVRKDIATLHEKNSKLEEEYKVFGTL
YDVASGKTGSRVSLHRFVLGVLLDDVLIQASQRLSLMSKGRYILARKTEGFKGAAGRGLD
LMVEDGYTGKTRDVATLSGGESFMAALALALGLSDVVQSYSGGIRLDTLFIDEGFGSLDP
ESLDLAIQTLVDLQQTGRMIGVISHVSELKEQMAQRIDVEPSRLGSTVSVKSQCSFAV
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattaaacttaccatgcaagcctttggtccgtttgcaaaaaccgaagtcatt
gactttgaaaagcttggccgtaaccctctgtttttgattaatggtcctacaggctcaggt
aaaacgtcgatcttagatgccatttgctttgccctttacggtgaaactaccggtaatgag
cggcaaggcatccagatgcgatgtgacttatcggcgcaagacttaccaaccgaagtcgtt
ctagaattttcgttacatggcaaacaataccgagttgtgcgatctccagagcaggaagcg
cccaaagcgcgtggtgaagggatgacggtaaaaaagcacactgcggctctttatgaactc
ggcgagaccgaaaagctcatcactagcaagacgactcaagttaaaacagaagtgagcaat
attattggtttgaatgaaacacaatttcgccaagtaatggtattgcctcaaggaaaattc
cgggagctgttgcttgctagttctaaagagcgcgaagaaatttttggtcagctctttcaa
acggacatatataaaaaaattgagtacgcgctcaaagataaagcgagcgcaatcagtaaa
gcgaaagatgaatttgataatcaaattcgaggcgctttacaagttgcaggagtgagttca
gagcaggaattattacaccagcttgaacaagcaactgagcagctagaggtcgatagaaag
aatgaacaagcttcgttagataagctaaatgttgctaaatctgaattgcaaaaagcggaa
actattaatggagagttttcgaaacgagagcaagcagaaaacgcactcaagctgcatcta
gaacactcagactcgataaaagttcgtcaacagcaattagaaaatgctaaaaatgccaat
aagatagaattaccctacgtctcattacaaaatgcaaaaactcaaactcaagagctcaga
caaaaaatcgtagctttgaaagagagccttgataaagccaatgctgttacgaaagaaaaa
gaaaacttgcagcaaagtgcaaaagaagccgcggcaaaagtcccacagttaacgcaactg
cagtatcaacttgaaagcatgaaagacaagttggttgaaaaagccaacttggaaagaaaa
ataacggcaggtcatcaacaaaagcaacaatttgaagcaacgttaaaacagtacatagag
ctgaaagacaagttggcgtttcaggcgcaacagggccagaaagatctagagcaagcccga
gtagatgttgcgcttgttggcagcatcgatgcggaaataaaacaaaaacaacgactacta
caggatctacaaaagctgcatggtcttactttggagctctctaaactcacggcgttaacc
gtaagcaagcagcagccattacaggaggccagtcagcgctatatgcagtgtcaacaagcc
gctgatacgatagagcttaagtggcacaacgctcaagcggcagtattagcgcagcgacta
aaggcaggggaagcatgtccggtatgtggcagccaagtgcatcctaaccctgcaacgttt
gttgaagaaatcgttacaaaagagcaagttcaggcggctagagcgaaagaaagagaagct
caagcatcattgaaccagctaagtaatcagcaagaacaacataacgttgtcattattcag
catcagaatcaaatcgatcagttgaaagaagagcttggtgagcatgctgcatctgagatc
tcgacggttcaaactgggttgcaggcgcttaatgatcaacttctacgtctacaatctatt
gatattgaaaagctagaaaagaacgttgaacagcttaatcaacgctgcttagtgggtgaa
aataaaattcatgagctgcagaatcaaatggcggcaaatgaatcaaccgttcaagcaaac
caagaacaattgactcaattacaagcttccattgatccgaaatacagttccgttgatgcg
cttgagcgtgacatttcgctcacaaaagagcaaattctgaccttgaatacaggtttagaa
aaggcacaaaacgctttgcagcaagcggtattagcgcaatcgaatgctgaaagtcagtta
gtgacgaacaagcagtggctatctgagtcagaacaaaagcttagccaagcagaattagcg
tggaatgaggcattacaggcgagtaaatttgaggatgaaagcagttatctaaatagcaga
gtgacagatgatgagcttcaagcgtggcagaaagaaatagacaacttcaaacagacacaa
accaagcttgaacaaacactacatgatttaaaccatgcattgaaagcgcttgaaagaccg
gacttggattcgcttaacgacagcttaaccactctgcaggcgcagtatattgaagtaagg
aatcagctcgataccacgcgctcaacctttgagcgaattgaaaaagttcgtaaagatatt
gctacgctgcatgagaaaaatagcaagttagaagaagagtacaaagtgtttggtacgtta
tacgacgttgccagcggtaaaacaggcagcagggttagcctgcatcgctttgttcttggt
gtactgttggatgatgttttaattcaggcctctcaacgtttaagcctcatgagtaaaggg
cgctatattcttgctcgaaaaacagagggcttcaaaggcgctgcgggtcgcggcttagat
ttaatggttgaagatggttacacaggaaaaacacgtgatgttgcgacactttccggtggt
gaatcgtttatggcagcgcttgcattggcgcttggcttgtcggatgttgtgcaatcctat
agtggtggtatccgtttagacactttattcattgatgaggggttcggtagtttagatccc
gagtctttggatctcgccattcaaacgctagtggatttacaacagactggacgcatgatc
ggtgttatctctcacgtttctgagttaaaagaacaaatggcgcagaggattgatgttgaa
ccatcaagactcggttcgacagtatcggtcaaatctcaatgtagcttcgctgtctaa
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integrated database retrieval system
