KEGG   Vibrio diabolicus: AL552_07835
Entry
AL552_07835       CDS       T05332                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
vdb  Vibrio diabolicus
Pathway
vdb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AL552_07835 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vdb02044]
    AL552_07835 (icmF)
Secretion system [BR:vdb02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AL552_07835 (icmF)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical AAA_22 AAA AAA_28 AAA_33 AAA_19 AAA_24 AAA_30
Other DBs
NCBI-ProteinID: AVF93661
LinkDB
Position
2:complement(1693149..1696667)
AA seq 1172 aa
MRIKEIGRIFTQRWFLGLIGVAACSIFIWVVGPLITIAGYEPLKSDFQRLVTILVLVFVW
ALFNVTKQHKQKVKEDESIQTLLEVDSQSDKEAASEIDLMRERIEQAVKVVTKTHKGKRS
LYDLPWYVLIGPPGTGKTTVLKQSGLEFPLADSLGSDSIAGVGGTRHCDWWFANKAVLID
TAGRYTTQDSQEKVDSKAWHGFLGLLKKYRTQRPINGAIVTISLASVMSQTRTERSLHAR
AIKSRLQELKNQLGMQFPIYVLLTKMDLVAGFNEFFSDLSKEEREELFGFMFPREVADER
GVISLFNKEFHGMLERLDARMLRILETEDDLEKRALIFEFPKQLRVLQANLDEFLAEIFA
QNSFEEPALIRGVFMLSSVQEGLPVDKLMNESTNGLGLNRLALAKSPTGSHSYFVKNLFD
KVIFKEQLLGTVNRHYQKQSGWMRRGVYIGCACLLLGASALWLMSYKWNSQLIVDTNEQA
GHIEAMIGAESLDFEADIISAVETLDRLMTLPLGKQSNYGDADSVKRFGLYQGDKVSQAA
NNAYSDALTQYYAPLLLDSLVTEMESNQQHREYLYETLKTYLMLFNPDKYQQDEVLAWFN
FYFERQYPGELNLDLRKGLLQHTQNLLENNGQGFSYNTAAVTNAREVLTQMSLPERAYQR
MKIQFSKSHVPSFRLTDVLGPKGLEQFERASGKPLSQGISGFYTYNGFHSIFQIQINRTV
KSLMEENWVYGDDLKAHEIDQDSAIQGVQSRYYQDYVNEWKTLIEDIQLKQAPSLELATE
QARVLSGVERPIESLLRAIQKEVGLSKVSLSENQKATSEVAGKVAKVKFSNTADRLDMYL
PEENGFNVALPGKEVESHFSEILRLGEQDFDDIQQAMVNLRSYLSDLSSSGNNQKIAYKS
ILDGTVTQDVAASFARAKELLPRPFNQWLGELSQESVKFAESGSKDHLNQLWVTQVVRPY
QRTIAGRYPFEPNASREVRLKDFKRFFGYGGTLDSFFQEYLEPFVDTSKSRWRLEKEIGV
RPETLMVFQRAKRIRQSFFESDNSLRVEFGMKPVYLDQHITRFVLELGKQDLVYKHGPAR
VKSLSWPAGQDQTRIVFTPPESKREIAHTYEGEWGIFKLLDQSLKARPESRKDNIVMIDL
KGNKVQLELIPSSAINPFWSNEMERFRCPRTL
NT seq 3519 nt   +upstreamnt  +downstreamnt
atgcgtattaaagaaattggcagaatatttactcaaaggtggtttctcggtcttatcggt
gtcgctgcttgttcaatttttatttgggttgttggtccacttatcacgatagcgggatat
gagccgctaaagagcgacttccaacgactcgtcacgattttggtgctggtgtttgtgtgg
gctttattcaacgtgactaagcagcacaagcaaaaagttaaagaagacgaaagtattcaa
acgttacttgaggttgatagtcagtcagataaagaagcggcgagtgaaattgacttaatg
cgcgagcgtattgagcaagctgtcaaagtagtaacgaaaacacataaaggaaagcgaagc
ttatatgacttgccttggtatgtgttgatcggccctccagggacaggaaaaacaacagtg
ttaaagcagtcagggctggagtttccgttagcggatagccttggttctgactctattgct
ggtgtcggtggaactcgtcattgtgattggtggtttgcaaataaagcagttctgattgat
acggccggtcgatacacgacacaagacagtcaagaaaaggtcgactctaaagcatggcac
ggcttcttagggttgttgaaaaaatatagaacgcaaaggccaattaatggtgcaattgtc
acgatcagtttagccagtgtgatgtcgcagacaagaaccgagcgaagccttcatgcccga
gctatcaagtcgcgccttcaagaactgaagaatcagttagggatgcaatttcctatttac
gtactactgaccaaaatggatttagttgcgggtttcaatgagttcttctctgatctaagt
aaggaagagcgtgaggaattgttcggtttcatgtttccgcgtgaagtggctgatgaaaga
ggggttatttctttattcaataaagaatttcatggcatgttggagcgccttgatgcgcga
atgctgagaatccttgaaactgaagatgatttagagaagcgagcacttatttttgaattt
cctaaacagctaagggtattgcaagctaaccttgatgaatttttagcggaaatatttgca
caaaatagttttgaagagccagccttgattcgtggtgtgtttatgttgagctcggtccaa
gaaggcttaccagtcgataagttaatgaatgaatcgaccaatggacttggactaaatcgc
ctcgctctagcaaaaagcccaacaggatctcatagttatttcgtgaagaacttgtttgat
aaggttattttcaaggaacaactgttaggaacggttaatcgtcactatcaaaagcagtca
gggtggatgcgccgaggtgtttacattggctgtgcttgtctactgctaggtgcgtctgca
ctttggcttatgagctacaagtggaattctcagttgattgtcgataccaatgagcaagcc
ggccatattgaagcaatgattggtgctgagagcctagattttgaggcggatattatctct
gccgtagagacattagaccgattgatgacgcttcctctaggaaagcaaagcaactacggc
gatgctgattccgtaaaaaggtttggtctctatcaaggagataaagtctcacaggcggcg
aacaatgcatattctgatgcgttgacccaatattacgctcccttgcttcttgatagcttg
gtgacggaaatggaaagtaatcaacagcatcgagagtatttgtatgaaacgttgaaaact
tatttgatgttatttaatccagacaaataccaacaagatgaagtgttggcttggtttaac
ttctattttgaacgtcaatatccgggtgaactaaatctagacttaagaaaaggtctgtta
cagcacactcaaaatttattagagaataatggacaaggcttttcttataatactgctgcc
gtgactaatgctcgcgaggttttgacacaaatgtctctaccagaacgtgcttatcagcga
atgaagatacaattttcgaagagtcatgttccttcatttcgtttgactgatgtcttgggg
cctaaagggcttgagcagtttgaacgagcgagtggaaagccgttatcacaaggcatttcg
ggcttttatacgtacaatggctttcatagcatttttcagattcagatcaaccgtacagta
aaaagcctaatggaagagaactgggtttatggtgacgatcttaaggctcatgaaattgat
caagatagcgctattcaaggagtccaatctcgatactatcaagattatgtgaatgaatgg
aaaactctgatcgaagatattcaacttaagcaggctccgagcctagagcttgcaacagaa
caagctagagttctatctggagttgaaagaccaatcgaatcgttgttgagggcaatccaa
aaagaagttggtttgtcgaaagtatcattgtcagaaaatcagaaggccacttctgaagtc
gctggtaaggttgccaaagttaaattttcgaatacggcagatagactagacatgtacttg
cctgaagaaaatggtttcaatgttgcactgccaggtaaagaagtcgaatctcatttttcg
gagatcttacgtctcggcgaacaagactttgatgatattcaacaagcgatggttaacttg
cgctcgtatttaagcgacttatcaagctcgggtaataatcagaaaattgcttacaaaagt
attttagatgggaccgttacacaagatgtggctgcttcctttgctcgcgctaaagaactt
ttgcctaggccatttaatcaatggctaggtgaactttctcaagagtcagttaagtttgcg
gagagcgggtcgaaagatcatctaaatcagctttgggttacgcaagtggtgcgcccttat
cagcggactattgcgggtagatacccattcgagccaaatgcaagcagagaagtaaggctg
aaggacttcaaacgtttctttggttatggaggtacgcttgactcattcttccaagagtat
cttgaaccgtttgtcgatacttcgaaaagtcgttggcgattagaaaaggaaattggagtt
cgtccagaaacgctgatggtctttcaaagagcgaagcgtatcaggcagtctttctttgaa
tctgataattcattgcgcgtagagttcggtatgaaaccagtgtatctggatcagcacatt
actcggtttgttctagagctaggtaagcaagatttggtttataagcatggaccagcacga
gttaaatccttgagctggcctgcgggtcaagaccagactcgaatagtgttcacaccgcca
gaatctaaacgtgagattgcccatacttatgaaggtgagtggggcatattcaaactgcta
gatcaatcacttaaagcaagaccagaatcacgtaaagacaacatagttatgattgattta
aagggaaataaggtgcaactagagcttattccgtctagtgctattaatccgttttggtca
aatgaaatggagaggttcagatgtccacgaaccttgtaa

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