KEGG   Vibrio diabolicus: AL552_09460
Entry
AL552_09460       CDS       T05332                                 
Name
(GenBank) general secretion pathway protein GspD
  KO
K02453  general secretion pathway protein D
Organism
vdb  Vibrio diabolicus
Pathway
vdb03070  Bacterial secretion system
vdb05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AL552_09460
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    AL552_09460
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vdb02044]
    AL552_09460
Secretion system [BR:vdb02044]
 Type II secretion system
  General secretion pathway protein
   AL552_09460
SSDB
Motif
Pfam: Secretin Secretin_N
Other DBs
NCBI-ProteinID: AVF94019
LinkDB
Position
1:113900..115948
AA seq 682 aa
MNKQFKLTTSALLCSSLLSGCVLTDASERQYPVSGSFLESEATNSVLSKDEVTEKKASSD
LEPKVAKPGAVYKTVPTLKVSNDRFEAGQALSTNFSDEASLKLAADAMPLNDFLHYVFGQ
ILQVDYILGDNLQGVTTPVTLNVQNDISPRRLFDLTQELLVQRGISVQARDGLYVIMNLK
QDGKSSAVLGYGSTPESVPDGAIDVVQVVPLKFTFSNSTMGVIRELTSVRVSPDLRQGVL
ILSGKRSEVVRAIELLKILDAPSNTSKHIGLVKLRYITTEDFIATVTELLQNEGIVADGG
VNDKRLSMVQIPQLGALAVFASEDSFIKRVRYWAAQMDRPSQGADLRYFIYQPKYARAAD
IGDSLSKLIGGRSLSVQKSADKDSSKIEVNSQSSNSVSNDKLSLVVDERANTLIFRSSST
EYQALLPLIAQLDVMPKQVILEMTIAEVTMTDEFKFGVEWAFSNGNFSASTKDAFGLDKV
GGGLIKWMSGDDFINLQAFESNNNVNIMSKPSLLVRDGVEANINVGTDIPVVGQTTTDSN
NGVTRSVEYRKTGVKVAVTPTVNAQGIVSMVISQENSNQVDGGTSVEGNPSIFDRSITTE
VVAESGQTVILGGLISENVTNNGSAVPFLGSLPVVGGLFGTKTDNKTKTELVIMVTPRIV
ESSSQWDDLKARFAQGLEHVKI
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgaataaacagttcaagttaacaacgtctgcactgttatgcagttcattgttgtcaggg
tgtgtgttaacagacgcttctgagcgtcaatatccggtcagcggttcatttttagagtct
gaggcaacaaacagcgtactatcaaaagatgaggtcactgaaaagaaagctagttcagac
ttagagccaaaagtagcaaaaccaggggctgtgtataaaacagtacctactctaaaggtt
agtaatgaccgttttgaggcgggtcaggcactctcaacgaacttcagtgatgaagctagc
ttaaagctggctgctgacgctatgcctttgaatgatttcttgcattatgtttttggtcag
atactgcaagttgactacattcttggggataacttgcaaggagttacaactccggtcact
ctgaatgttcaaaatgatatcagcccgagacgtctgtttgatttgacacaggagcttttg
gttcagcgtggtattagtgtgcaggctcgtgatggtttatatgtcattatgaacttgaaa
caagatggtaaatctagtgccgttttgggttatggctccacgcctgaatctgtgccagat
ggggctatcgacgtagttcaagtagttcctctgaagtttactttcagcaattcgactatg
ggcgtaattagagaacttacgtcagttagagtttctccagatttaaggcagggcgtactc
attctgagcggaaagcgctcggaggtagttagggccattgaattactgaaaatccttgat
gctccctcaaatactagcaagcatatcgggttggtgaagctaaggtacattactactgag
gacttcatcgctaccgtgaccgagcttttacaaaatgagggaattgttgctgatggtgga
gttaatgataagcgattatcaatggtacagatccctcagctaggagccttggctgttttt
gcatcggaagactcttttataaagagagttcgatactgggctgcgcaaatggatcgacca
agtcagggcgcagatttacgttatttcatctatcaacctaagtatgcaagagctgcagat
ataggtgatagcttaagtaagctaataggtggtcgttcgctatcggttcaaaagagtgca
gacaaagactcttctaaaatagaagtaaatagccaaagtagtaactcagtatcgaatgac
aaactgagtttagtggttgatgaaagagcgaatacattgatattcagatccagctctacc
gaatatcaggctttgctaccgcttattgctcagctagatgtaatgcctaagcaagttatt
ttggaaatgacaattgcggaggtaacgatgactgatgaatttaagtttggggtcgagtgg
gccttttctaatggtaatttttcagctagcacaaaagatgcttttggtttggataaagtc
ggaggtggcttgatcaaatggatgagcggtgatgacttcattaacttacaggcattcgag
agtaataataacgttaatatcatgtcaaaacctagcttgttagtaagagatggtgttgaa
gcaaatattaatgtcggtacagatattcctgtagttggacaaacaactacagacagcaat
aatggtgtaacacgttcagtggaataccgaaaaactggtgtaaaagttgctgttactcca
acagtcaacgctcaaggtattgtttcaatggttatttctcaggaaaatagtaaccaagtt
gatggtggtacctctgtagagggcaacccttcaatttttgatcgtagcattacaacagaa
gtagttgctgaatctggtcaaacagtaattctgggtggcttgatcagtgaaaatgttaca
aacaatggttcagcagtaccattcttaggttctttacccgttgttggtggtttgttcgga
actaaaactgataacaagaccaaaactgagcttgtgattatggtgacgccaagaatcgtt
gaaagcagcagccaatgggatgatctgaaagcacgttttgctcaggggcttgagcacgtc
aaaatttaa

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