Vibrio diabolicus: AL552_09870
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Entry
AL552_09870 CDS
T05332
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb00230
Purine metabolism
vdb00240
Pyrimidine metabolism
vdb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
AL552_09870 (cpdB)
00240 Pyrimidine metabolism
AL552_09870 (cpdB)
Enzymes [BR:
vdb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
AL552_09870 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
AL552_09870 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
DUF4649
Motif
Other DBs
NCBI-ProteinID:
AVF96723
LinkDB
All DBs
Position
1:complement(183527..185482)
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AA seq
651 aa
AA seq
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MAVHPISLAVLSGMLTLAGPAMADTIKLRIIETTDIHTNVMDYDYYKDQPSQQIGLSRAA
TIVKQAKSEAENTVLVDNGDLIQGSPMGDYMAAKGINAGDVHPVYKAMNQLDYDVGNIGN
HEFNYGLDFLQKTLAGANFPYINANVFDKKTGEHYFKPYLIKTHTFKDTNGEAHQIKVGY
IGFVPPQIMVWDKKNLEGKVFAKDIKETAEKLIPQMKKEGADVIVAIPHSGISTDPYKLG
AENSVYYLTQVDGIDAIAFGHSHAVFPGKDFANLPGVDTEKGTINGVTSVMPGRWGSHVG
VMDLMLKEEDGRWQVVEGQAEARPIFDKVNKKSLAKADEGIVKALEEDHKGTREFVNQPI
GKANDVMYSFLALVQDDPTIQIVNLAQKDYVERFIQGDPDLADIPVLSAAAPFKVGGRKN
DPNNFTEVESGQLTFRNAADLYLYPNTLVAMKVKGKEVREWLECSAGQFNHIDINNPEPQ
SLIDWDNFRTYNFDVIDGVNYQIDITQPPKYDASCKVINPDSQRIVNLTFNGKPVDSKQD
FIIATNNYRAYSNTFPGTGPDFIAFDAPDENRSVVAAYISRVSEEKGEVTPSADNNWSFA
PIKSDKKLDIRFETSPSDKAAQFIKDKGQYPMKRVATDDIGFAIYQIDLNK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
gtggcagttcaccctatttccctcgcagtgttaagtggcatgctaacgcttgctggtcct
gcgatggccgataccatcaagcttcgtatcatcgaaaccaccgacattcataccaacgtg
atggattacgattactacaaagaccaaccatcacagcaaattggtttaagtcgcgctgcg
accatagtgaaacaggctaagtccgaggcagaaaacacggtattagtagataacggcgat
ttaattcagggcagcccaatgggcgattacatggcggcgaaagggattaacgctggcgat
gtccacccagtctacaaggcgatgaaccaactagactacgatgtgggcaacattggcaat
catgagttcaactatggcttagattttctacaaaagacgttggcgggcgctaacttccct
tacatcaacgcaaacgtatttgataaaaaaaccggtgagcattacttcaagccttacctg
atcaaaacccacacctttaaagacacaaacggcgaagcgcatcaaataaaagtgggttat
atcggctttgtaccaccacaaattatggtgtgggacaagaagaacctagaaggcaaagtc
tttgctaaagacattaaggaaacagcagagaaactgattcctcaaatgaagaaagaaggc
gcagacgtgattgtggcgattccacactcgggcatctccactgacccatacaagcttggc
gcagaaaactctgtctattacttaacgcaagttgatgggattgatgccattgcttttggc
cactctcacgcggtcttcccagggaaagactttgcaaacctacctggtgttgataccgag
aaagggaccatcaatggtgtgacgtcagtgatgcctggtcgctggggaagtcatgtaggt
gtgatggatttgatgctgaaagaggaagacggcagatggcaagtcgtcgaaggccaagca
gaagcacgccctatcttcgataaagtaaataagaagtcattagctaaagccgatgaaggt
attgtgaaagcgttagaagaggatcacaaaggcactcgtgaatttgtaaaccaaccaatc
ggcaaagcaaatgatgtcatgtacagctttttggcattagtgcaggacgaccccaccatt
caaatcgttaaccttgctcagaaagattacgtggaacgctttattcaaggcgacccagat
ctcgctgacattccagtattgagtgccgcagcaccatttaaagtcggggggcgcaagaac
gatccgaataactttacagaagtcgaatccggtcagctcaccttccgtaatgctgctgat
ctttatttatatcccaacaccttggtcgcgatgaaagtgaaaggtaaagaagttcgcgaa
tggctagaatgcagcgcgggtcaattcaaccacatcgacatcaacaatcctgaaccgcaa
tctttgattgattgggataatttccgtacgtacaacttcgatgtcattgatggggtgaac
taccagatcgatataacccaaccgcccaaatacgatgcgagttgcaaagtgattaatcca
gattctcagcgtattgtgaatctgacattcaatggtaagcctgttgattcgaagcaggac
ttcatcatcgcaaccaataactatcgtgcttatagcaataccttccctggtacgggccca
gactttattgcgtttgacgcaccagatgaaaaccgctctgtcgttgccgcttatatttct
cgcgtgagtgaagaaaaaggtgaagtgacaccaagcgctgacaacaactggtctttcgca
ccgattaaatccgataaaaagctagatattcgcttcgaaacatctcctagcgataaagcg
gcgcaattcattaaagataaaggtcaatacccaatgaaacgtgtcgcgactgacgatatt
ggtttcgcgatttaccaaatcgatctgaataagtaa
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