Vibrio diabolicus: AL552_10810
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Entry
AL552_10810 CDS
T05332
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AL552_10810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vdb03400
]
AL552_10810
Enzymes [BR:
vdb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
AL552_10810
DNA repair and recombination proteins [BR:
vdb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AL552_10810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AVF94266
LinkDB
All DBs
Position
1:392937..393824
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AA seq
295 aa
AA seq
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MTNMKNKLGNKLIGAHVSAAGGVDQAPLRAREIGANAFALFTKNQRQWVAKPLEAKTISA
FKANCKMLGFGAEHILPHDSYLINLGAPEADKLDKSRAAFIDEMERCNQLGLTLLNFHPG
SHLKKVSEQECLATIAESINLAHKAVPNVIAVIENTAGQGTNLGWKFEHLAEIIDQVEDK
ERVGVCLDTCHTFTAGYDLRTKEDCEHTFAEFDRIVGMHYLRAMHLNDSKVEFASKVDRH
HSLGKGEIGWDCFEYIAKDPRFDSIPLILETIDPDIWQQEINALRQFHLAAIDNQ
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacatgaaaaacaagcttgggaataaactcattggtgcacatgtctctgctgct
ggtggggtcgaccaagcgccgttgagagctcgcgaaattggcgcgaatgcgttcgcacta
tttacaaaaaaccaacgccagtgggtggcgaagcctttagaagcaaaaaccatcagtgcg
tttaaagcgaactgtaaaatgctgggtttcggcgcagaacatattcttccccatgactct
tatctaattaacttaggtgcaccagaagcggataagttggataagtcacgcgctgcattc
atcgatgagatggagcgttgtaatcaattgggtttaacgttgctgaactttcaccctggg
agccacttaaagaaagtctcggaacaggagtgcttagcgacgatcgcagagtcgatcaat
cttgcgcacaaagcggtgccgaatgtgatcgcggtaatcgagaatacggctggtcagggt
acaaacctaggttggaagtttgagcatcttgctgaaatcatcgatcaagtggaagacaaa
gaacgtgttggtgtatgtctcgatacttgccacacgtttaccgccggttacgatctgcgt
actaaagaggattgtgagcatacctttgctgaattcgaccgtattgttgggatgcactat
ttaagagcaatgcatctaaatgattcaaaagttgagtttgccagcaaagtggatcgccac
cactcattaggcaaaggagagatcgggtgggattgctttgagtacatcgcgaaagaccct
cgatttgatagtatccctctgattttagaaacaattgatccggacatctggcagcaagaa
atcaacgcactgcgtcagtttcatctagcggcgatagataaccaatga
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