Vibrio diabolicus: AL552_10820
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Entry
AL552_10820 CDS
T05332
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AL552_10820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vdb03400
]
AL552_10820
Enzymes [BR:
vdb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AL552_10820
DNA repair and recombination proteins [BR:
vdb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AL552_10820
Prokaryotic type
AL552_10820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AVF94268
LinkDB
All DBs
Position
1:394108..394788
Genome browser
AA seq
226 aa
AA seq
DB search
MNQSPTWHDVIGEEKKQSYFVDTLNFVEAERAAGKAIFPPAKDVFNAFRFTEFNDVKVVI
LGQDPYHGPNQAHGLCFSVLPGIKTPPSLVNMYKELAQDIEGFQIPQHGFLQSWAEQGVL
LLNTVLTVEQGKAHSHSKTGWETFTDRVIEAINQHQEGVVFLLWGSHAQKKGRFIDRNKH
HVLAAPHPSPLSAHRGFFGCKHFSQANQLLASQGKAPINWHLPLTV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtcacccacttggcacgatgtgatcggcgaagagaaaaaacagagctacttt
gtagacactttgaattttgtagaagcagaacgcgccgcaggcaaagcgattttcccgcca
gcgaaagatgtctttaacgcgtttcgatttaccgagtttaacgatgttaaagtagtgatt
ctgggacaagacccataccatggtccaaatcaggcgcatggtttgtgcttttccgtgctt
cctggaatcaaaacgccaccgtcactcgttaatatgtataaagagctggctcaagatatt
gaagggttccaaatccctcagcatggattcttacaaagctgggcagagcaaggtgtattg
ttgctcaatacggtattgactgttgagcaaggtaaagcgcattcacattcaaaaacgggg
tgggaaacgttcactgaccgagtgattgaagcgataaaccagcatcaggaaggcgtggtg
tttttattgtggggctctcacgctcagaagaaagggcgctttattgatcgtaataaacat
catgtgttagccgcaccacatccatcaccactctcagcacaccgaggtttttttggttgt
aagcatttctctcaagcaaaccagttacttgcctcgcaaggaaaagcaccaatcaactgg
catttgccattaactgtataa
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