Vibrio diabolicus: AL552_10845
Help
Entry
AL552_10845 CDS
T05332
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
vdb
Vibrio diabolicus
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vdb03009
]
AL552_10845
Enzymes [BR:
vdb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AL552_10845
Ribosome biogenesis [BR:
vdb03009
]
Prokaryotic type
rRNA helicases
AL552_10845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_C_2
AAA_11
UvrD-helicase
UMPH-1
AAA_30
Utp25_C
AtuA_ferredoxin
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AVF94273
LinkDB
All DBs
Position
1:complement(399014..400237)
Genome browser
AA seq
407 aa
AA seq
DB search
MIRTFAELDLDQNLLEAIEEMGYERPTKIQAEAIPQALDGRDILASAPTGTGKTAAFVLP
ALQYLQDFPRRKPGPARILILTPTRELAMQIADQARALAKNTKLNIFTITGGVQYQEHAD
ILATTQDIVVATPGRLKEYIDAERFDCRAIEWLILDEADRMLDMGFAPTVDRLSNECRWR
KQTLLFSATLEGKGVEGFTADLLNDPAEIDAKSPLRERKKIAQWYHRADDAEHKLELLKH
IITQQAERTIVFLKTRERLAELRAQLESAQIPCSWIQGEMPQDRRNNAISRFRDGTVNVL
LATDVAARGIDLPDVSHVINYDMPRTADVYLHRIGRTARAGKKGNAISIVEAHDQPMMDR
VARYVKEDIKERFVKEMRPKHKKPVFKKKKKKEDKKKPAKKKTAKKK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
gtgatcagaacctttgctgaacttgatctagaccaaaacctacttgaagccattgaagag
atgggttacgaacgcccaacaaaaattcaggcagaagcgattccacaagcgttggatggt
cgtgacattttagcgtcagcgccaacaggtactggtaaaacggcagccttcgtcctgcct
gcattgcaatacttgcaagacttccctcgtcgcaagcctggacctgcgcgtattttgatc
ctaacgccgacgcgcgaattggcgatgcaaatcgctgatcaagcacgagctttggcaaaa
aacactaaactgaacattttcaccatcacaggtggtgttcaataccaagagcacgccgat
atccttgcgacaacacaagacattgtggttgcaacgcctggccgtttaaaagaatacatt
gatgcagagcgttttgattgccgtgcgattgaatggttaattctggatgaagcagaccgt
atgctagacatgggttttgctcctactgtcgatcgtctatctaacgagtgccgctggcgt
aaacaaacccttctgttctcagcaactttagaaggtaaaggcgtagagggctttaccgct
gatctgttgaatgacccagcagagattgatgcaaaatcgccactgcgtgaacgtaagaag
attgctcagtggtaccaccgtgctgatgatgcagaacacaagcttgaattactaaaacac
attattactcagcaagcagagcgcaccattgtcttcttgaagacacgtgagcgtttggca
gagctacgagcgcagcttgagagcgcacagattccatgttcttggattcaaggtgaaatg
cctcaagatcgtcgtaacaatgcgatttctcgcttccgcgatggtactgtaaacgtgctg
ctcgcaacggacgttgctgcgcgtggtatcgaccttccggatgtgtcacacgttattaac
tacgacatgccacgcacggctgatgtctaccttcaccgtattggccgtacggctcgtgcg
ggtaagaaaggtaatgctatctcaatcgtagaagcacacgaccaaccaatgatggatcgc
gttgcacgttacgtgaaagaagacatcaaagagcgtttcgtgaaagagatgcgtccgaaa
cacaaaaaacctgtgtttaagaagaaaaagaaaaaagaagacaagaagaagccagcgaaa
aagaaaaccgctaagaagaagtaa
DBGET
integrated database retrieval system
