Vibrio diabolicus: AL552_10920
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Entry
AL552_10920 CDS
T05332
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
vdb
Vibrio diabolicus
Pathway
vdb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL552_10920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vdb03019
]
AL552_10920
Messenger RNA biogenesis [BR:
vdb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AL552_10920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AVF94287
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All DBs
Position
1:415154..415678
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AA seq
174 aa
AA seq
DB search
MIDGDGYRLNVGIVICNNHGQVFWAKRYGQHSWQFPQGGIDEGETPEQAMFRELYEEVGL
TKKDVKIIATSRHWLRYKLPKRLVRWDSKPVCIGQKQKWFLLRLECDESRINMQRGKSPE
FDGWRWVSYWYPVRQVVSFKRDVYRRAMKEFASLAMPFRERKAKGKRKKQQRRG
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgatagatggcgatggttaccgacttaatgttggtattgtgatatgtaataaccatggt
caggtcttctgggctaaacgatacgggcaacactcatggcaatttccacaaggtggaatt
gacgaaggtgaaactcctgaacaagccatgttcagggagttatacgaagaagtcggttta
acgaaaaaagacgttaagatcattgcaacaagtcgtcattggttaagatataagctacca
aaacgattggtgcgttgggactccaagcctgtttgtatcggccaaaaacagaaatggttt
ctgctgagattagaatgcgatgaatctcgtattaatatgcaacgcggaaaatcccctgaa
tttgatggttggcgctgggtgagttattggtatccagttaggcaagttgtttctttcaag
cgagatgtttatcgacgagcgatgaaagagtttgcatccttagccatgccttttcgagag
agaaaagcgaaagggaaaagaaaaaagcaacaacgtagaggataa
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