Vibrio diabolicus: AL552_11870
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Entry
AL552_11870 CDS
T05332
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb00260
Glycine, serine and threonine metabolism
vdb00460
Cyanoamino acid metabolism
vdb00630
Glyoxylate and dicarboxylate metabolism
vdb00670
One carbon pool by folate
vdb00680
Methane metabolism
vdb01100
Metabolic pathways
vdb01110
Biosynthesis of secondary metabolites
vdb01120
Microbial metabolism in diverse environments
vdb01200
Carbon metabolism
vdb01230
Biosynthesis of amino acids
vdb01240
Biosynthesis of cofactors
vdb04981
Folate transport and metabolism
Module
vdb_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AL552_11870 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AL552_11870 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AL552_11870 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AL552_11870 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AL552_11870 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AL552_11870 (glyA)
Enzymes [BR:
vdb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AL552_11870 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AVF94455
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All DBs
Position
1:623947..625197
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AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEQLAIDRACKLFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEQLALEHKPKMIIGGFSAYSQI
VDWKRMREIADKVDAYLFVDMAHVAGLIAAGEYPTPVPHAHVVTTTTHKTLAGPRGGLIL
SNAGEDMYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKAYQARVVKNAKAMVGQ
FQERGYKIVSNGTENHLFLVDLIDKDITGKDADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTEEDAKELANWMCDVLDNIGNEEVIEATKQKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgcagattacgatgcggaactgttcgcagctatccag
gaagaaactcttcgccaggaagagcacattgaacttatcgcttctgaaaactacacaagc
ccacgtgtaatggaagcgcaaggttctcagctaacgaacaaatacgctgaaggctaccca
ggcaagcgttactacggcggttgtgagtacgtagataaagcggaacaacttgctatcgac
cgtgcatgcaaactgttcggttgtgaatacgcgaacgtacagcctcactcaggttctcaa
gcaaacagcgcggtttacatggcgcttcttaacccaggcgatacagttctaggcatgagc
ctagcgcacggtggtcacctgactcacggttctccagtaaacttctctggtaagcactac
aacgttatcccttacggtatcgatgaagcggggcaaatcaactacgacgagatggaacag
ctagcgcttgagcacaagcctaagatgatcatcggtggtttctctgcttactcgcaaatc
gttgattggaagcgcatgcgtgaaatcgctgacaaagtagatgcttaccttttcgttgat
atggcgcacgtagcgggtcttatcgcagcaggcgaatacccaacacctgttccacacgct
cacgtggtaacaacaacgacgcacaaaacactagcaggtcctcgcggtggtcttatcttg
tcaaatgctggcgaagatatgtacaagaaattgaactcagcagtgttccctggtggtcaa
ggtggccctctaatgcacgttatcgctggtaaagcagtagcgttcaaagaagcgatggag
ccagagttcaaagcttaccaagctcgcgtagtgaaaaacgcaaaagcaatggttggtcaa
ttccaagagcgtggctacaaaatcgtatctaacggcacagaaaaccacttgttccttgta
gacctgatcgacaaagacatcactggtaaagatgcagacgcggcactaggtgcagcaaac
atcacagtgaacaaaaactcggtaccaaatgacccacgcagcccattcgtaacgtctggt
atccgtgtaggtacgccagcgatcactcgccgtggcttcactgaagaagatgcaaaagag
ctagcaaactggatgtgtgacgttctagataacatcggcaacgaagaagttatcgaagcg
actaaacagaaagtgctcgaaatttgtaagcgtctaccggtttacgcctaa
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