KEGG   Vibrio diabolicus: AL552_11870
Entry
AL552_11870       CDS       T05332                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
vdb  Vibrio diabolicus
Pathway
vdb00260  Glycine, serine and threonine metabolism
vdb00460  Cyanoamino acid metabolism
vdb00630  Glyoxylate and dicarboxylate metabolism
vdb00670  One carbon pool by folate
vdb00680  Methane metabolism
vdb01100  Metabolic pathways
vdb01110  Biosynthesis of secondary metabolites
vdb01120  Microbial metabolism in diverse environments
vdb01200  Carbon metabolism
vdb01230  Biosynthesis of amino acids
vdb01240  Biosynthesis of cofactors
vdb04981  Folate transport and metabolism
Module
vdb_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    AL552_11870 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    AL552_11870 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AL552_11870 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    AL552_11870 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    AL552_11870 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    AL552_11870 (glyA)
Enzymes [BR:vdb01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     AL552_11870 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase OKR_DC_1 DegT_DnrJ_EryC1 Aminotran_5
Other DBs
NCBI-ProteinID: AVF94455
LinkDB
Position
1:623947..625197
AA seq 416 aa
MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEQLAIDRACKLFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEQLALEHKPKMIIGGFSAYSQI
VDWKRMREIADKVDAYLFVDMAHVAGLIAAGEYPTPVPHAHVVTTTTHKTLAGPRGGLIL
SNAGEDMYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKAYQARVVKNAKAMVGQ
FQERGYKIVSNGTENHLFLVDLIDKDITGKDADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTEEDAKELANWMCDVLDNIGNEEVIEATKQKVLEICKRLPVYA
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgcttaagcgtgatatgaacatcgcagattacgatgcggaactgttcgcagctatccag
gaagaaactcttcgccaggaagagcacattgaacttatcgcttctgaaaactacacaagc
ccacgtgtaatggaagcgcaaggttctcagctaacgaacaaatacgctgaaggctaccca
ggcaagcgttactacggcggttgtgagtacgtagataaagcggaacaacttgctatcgac
cgtgcatgcaaactgttcggttgtgaatacgcgaacgtacagcctcactcaggttctcaa
gcaaacagcgcggtttacatggcgcttcttaacccaggcgatacagttctaggcatgagc
ctagcgcacggtggtcacctgactcacggttctccagtaaacttctctggtaagcactac
aacgttatcccttacggtatcgatgaagcggggcaaatcaactacgacgagatggaacag
ctagcgcttgagcacaagcctaagatgatcatcggtggtttctctgcttactcgcaaatc
gttgattggaagcgcatgcgtgaaatcgctgacaaagtagatgcttaccttttcgttgat
atggcgcacgtagcgggtcttatcgcagcaggcgaatacccaacacctgttccacacgct
cacgtggtaacaacaacgacgcacaaaacactagcaggtcctcgcggtggtcttatcttg
tcaaatgctggcgaagatatgtacaagaaattgaactcagcagtgttccctggtggtcaa
ggtggccctctaatgcacgttatcgctggtaaagcagtagcgttcaaagaagcgatggag
ccagagttcaaagcttaccaagctcgcgtagtgaaaaacgcaaaagcaatggttggtcaa
ttccaagagcgtggctacaaaatcgtatctaacggcacagaaaaccacttgttccttgta
gacctgatcgacaaagacatcactggtaaagatgcagacgcggcactaggtgcagcaaac
atcacagtgaacaaaaactcggtaccaaatgacccacgcagcccattcgtaacgtctggt
atccgtgtaggtacgccagcgatcactcgccgtggcttcactgaagaagatgcaaaagag
ctagcaaactggatgtgtgacgttctagataacatcggcaacgaagaagttatcgaagcg
actaaacagaaagtgctcgaaatttgtaagcgtctaccggtttacgcctaa

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