Vibrio diabolicus: AL552_11965
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Entry
AL552_11965 CDS
T05332
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vdb
Vibrio diabolicus
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vdb03016
]
AL552_11965
Enzymes [BR:
vdb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
AL552_11965
Transfer RNA biogenesis [BR:
vdb03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
AL552_11965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AVF94473
LinkDB
All DBs
Position
1:complement(643078..644502)
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AA seq
474 aa
AA seq
DB search
MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEEPEEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDKKPGVVIGVGGCVATQEGDHIRERAPYVDVIFGPQTLHRLPEMIKQSQS
DDAPVMDISFPEIEKFDRLPEPRAEGATAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDD
VLFEIAQLAEQGVREVNLLGQNVNAYRGPTHDGEICSFAELLRLVASIDGIDRIRFTTSH
PLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDI
QISSDFIVGFPGETDKDFQDTMKLIKDVDFDMSFSFIFSPRPGTPAADYPCDVSEQVKKE
RLYELQQTINAQAMRYSRLMLGTEQRVLVEGPSKKNLMELRARTENNRVVNFEGSADLIG
QFVDVKITDVFANSLRGELVRTEKDMDLRSVISPTQMMAKTRREDELGVATFTP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaactgctaattaaaacctggggctgccagatgaacgaatacgattcatca
aaaatggccgacctgcttaatgctgcaaacggctacgagctgacggaagagccagaggaa
gcagacgtacttctacttaacacctgttcgatccgtgaaaaagcgcaagagaaagttttc
caccagcttggccgctggaaaacactaaaagataaaaaacctggcgtagttatcggtgta
ggtggttgtgtagcaacgcaagaaggtgaccatattcgtgaacgtgcaccatacgtcgac
gttatttttggcccacaaactctgcaccgcctacctgagatgatcaaacaatctcagtcg
gatgacgcaccagttatggacatttcgttcccagagatcgaaaagttcgaccgcctacca
gagcctcgtgcggaaggcgcgacagcattcgtttctattatggaaggctgctcgaagtac
tgtacttactgtgtcgtaccgtacactcgtggtgaagaagtaagccgtccaatggatgac
gtgctgttcgaaatcgcacagcttgctgaacaaggcgtacgtgaagtaaacctactgggt
caaaacgtaaacgcgtaccgcggtccaacacacgacggtgaaatctgttcatttgcagaa
ctgcttcgtttggttgcgtctatcgatggtatcgaccgtattcgtttcacaacgagccac
ccgctagaattcactgacgacatcatcgcggtttacgaagatacgcctgagcttgtgagc
ttcctgcacttacctgtgcaaagtggtagtgaccgtatcctaactatgatgaaacgccct
cacaccgctatcgagtacaagtcgatcatccgtaaactgcgtaaagctcgtcctgatatt
caaatcagttcagactttattgttggtttccctggtgagacagacaaagacttccaagac
acaatgaagctaatcaaagatgtagactttgacatgagcttcagcttcatcttctctcca
cgtccaggtacgccagcagcggattacccttgtgatgtatcagaacaagtgaagaaagag
cgcctttacgaactacagcaaactatcaatgctcaagcgatgcgttactctcgcttaatg
cttggcacagaacaacgtgttctagttgaaggtccttcgaagaaaaacctaatggaactg
cgcgctcgtacagaaaacaaccgtgtagtaaactttgaaggtagtgcagacctaattggt
cagttcgttgatgtgaagattacggacgtatttgcgaactcactgcgtggtgagctagta
cgtactgaaaaagacatggatcttcgtagtgtgatttccccaacgcagatgatggcgaaa
acacgtcgcgaagatgagctgggtgtagctacttttacgccataa
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