Vibrio diabolicus: AL552_12990
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Entry
AL552_12990 CDS
T05332
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vdb
Vibrio diabolicus
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vdb03032
]
AL552_12990
03036 Chromosome and associated proteins [BR:
vdb03036
]
AL552_12990
03400 DNA repair and recombination proteins [BR:
vdb03400
]
AL552_12990
DNA replication proteins [BR:
vdb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AL552_12990
Chromosome and associated proteins [BR:
vdb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AL552_12990
DNA repair and recombination proteins [BR:
vdb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AL552_12990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
ACP_syn_III_C
Arteri_nsp7a
GTP_EFTU_D2
DUF7342
HU-CCDC81_euk_1
VWA_2
Nup214_FG
Motif
Other DBs
NCBI-ProteinID:
AVF94639
LinkDB
All DBs
Position
1:832388..832660
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQLVEQIAENADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIQIAEAKVPAFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaactcagttagtagaacaaatcgcagaaaatgcagacatttctaaagcgtca
gcgggtcgtgctctagatgcattcatcgaagcagtaagcggcactcttcagtctggtgat
caagttgctctagttggctttggtacattcagcgttcgtactcgtgctgcacgtactggt
cgtaacccaaaaactggtgaagaaatccaaatcgcagaagcaaaagtaccagcttttaaa
gctggtaaagcactgaaagacgcttgtaactaa
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