Vibrio diabolicus: AL552_13950
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Entry
AL552_13950 CDS
T05332
Name
(GenBank) transcriptional regulator
KO
K03746
DNA-binding protein H-NS
Organism
vdb
Vibrio diabolicus
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vdb03036
]
AL552_13950
03400 DNA repair and recombination proteins [BR:
vdb03400
]
AL552_13950
Chromosome and associated proteins [BR:
vdb03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
AL552_13950
DNA repair and recombination proteins [BR:
vdb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AL552_13950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DNA_ligase_A_N
MRP-S27
DUF4164
DUF3037
GTA_holin_3TM
DUF349
Knl-2-like_dom
YqaH
DUF6952
RmuC
RGS-like
Motif
Other DBs
NCBI-ProteinID:
AVF94808
LinkDB
All DBs
Position
1:complement(1039845..1040252)
Genome browser
AA seq
135 aa
AA seq
DB search
MSELTKTLLNIRSLRAFPRELTLEQLEEALDKLTTVVEERREAEEAERAAQAEQEAKLAE
IAEKIAQDGIDVEALITALSGETKTKGKAKRAPRPAKYKYTDSNGNEKTWTGQGRTPSAI
QEQLDAGKSLDDFLI
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagctgactaaaacccttctaaatatccgtagccttcgtgcatttcctcgtgag
ctgactctagaacaattggaagaagctctagataaactaactactgttgtagaagagcgt
cgtgaagcagaagaagcagaacgtgcagcacaagctgagcaagaagctaagctagcagag
atcgcagagaaaattgctcaagacggtattgacgtagaagcgcttattactgcgctatct
ggcgaaactaagacgaaaggcaaagcgaagcgtgcacctcgtccagctaaatacaaatac
acagactcaaacggtaatgagaagacttggactggccaaggtcgtacaccttctgcaatt
caagagcaacttgatgcaggtaaatctctggatgatttcctgatctaa
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