KEGG   Vibrio diabolicus: AL552_14740
Entry
AL552_14740       CDS       T05332                                 
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
vdb  Vibrio diabolicus
Pathway
vdb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    AL552_14740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vdb03400]
    AL552_14740
Enzymes [BR:vdb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     AL552_14740
DNA repair and recombination proteins [BR:vdb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     AL552_14740
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AL552_14740
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AL552_14740
SSDB
Motif
Pfam: ExoI_SH3 ExoI_C RNase_T
Other DBs
NCBI-ProteinID: AVF94958
UniProt: A0ABM6S8F6
LinkDB
Position
1:complement(1217858..1219279)
AA seq 473 aa
MHQDNQPTFFFFDYETWGTNPAKDRPSQFAGVRTDENFNIIGEPLVMYCQPPADYLPSPE
AALITGITPQKTVQEGLSEPEFIAKIHAELAKPNTTSLGYNSIRFDDEVTRYTCYRNFID
PYAWSWQNGNSRWDLLDVLRACHALRPEGVEWPENEDGFTSFKLEHLSVANGIEHSNAHD
AMADVIATIEMAKKVKAAQPKLFDYFFSMRQKRKLNELVDIVNMTPLMHVSGMLGRECQY
TSWIVPVAWHPTNNNAVITIDLAKDPQPILELSAEELHERLYTKREDLGELLPVPVKLVH
LNKCPILAPAKTLTAENAESIGIDRQQCLANLALLRQHPEIREKLISLFSVERKFDKSDD
VDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPLLFRYRARNFPGTLDEQ
EQRRWALHCREVFESQIEEYMLNLENLVHEHESDEKKIAILKSVYRYVESLAS
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgcaccaagataatcagcccacttttttcttctttgattatgagacatggggaacaaac
cccgcgaaagatcgcccaagccagtttgctggtgttcgtacagatgaaaacttcaatatc
atcggcgagcctttagtcatgtactgtcaaccaccggctgattatcttccgtctcctgaa
gccgcacttattactggtattactccgcaaaaaacggttcaagaaggcctttctgagcct
gagtttatcgctaagattcacgctgaactcgcgaaaccaaataccaccagtttaggctac
aacagcattcgctttgatgacgaagtgacacgttatacttgttatcgcaactttatcgat
ccatacgcatggagttggcaaaacggtaactcgcgttgggatttactcgatgtattacgc
gcgtgccatgcccttcgcccagaaggcgtagagtggccagaaaacgaagatggcttcact
agttttaaattagagcacttgtctgttgctaacggcatagaacatagtaacgcgcacgat
gcgatggcagacgtgattgcgactatcgaaatggcgaaaaaagtcaaagcagcgcaacca
aaattgtttgactacttcttttctatgcgccaaaagcgcaagctcaatgaattagtcgac
atcgtcaacatgacgccgttgatgcacgtttcaggcatgctagggcgcgaatgccagtat
actagctggattgtgcctgttgcttggcatccaaccaataacaacgctgttatcactatc
gatttagcgaaagaccctcaacctattcttgagctatccgcagaagagctacacgaaaga
ctctacactaagcgagaagatcttggtgaattgctaccggtgccagttaaactagttcat
ttgaacaaatgccctattctcgcccctgcaaaaacgttaacggctgaaaatgcagagtct
attggcattgatcgccagcaatgtctcgctaatctcgctttgttgcgccaacatcctgaa
attagagaaaagttgattagcctcttttcagtcgagcgtaaattcgataaaagtgatgac
gtcgatacgcaactttacgacggattcttctctccggccgatcgcgcagccatggatatc
attcgagaaaccgacccgaacaatcttgccgcattggacattgaatttgatgacaagcgc
attaaacctctattgttccgctatcgtgcgcgtaacttcccaggcacattagacgagcaa
gaacagagacgctgggcattacactgtcgagaagtgtttgaaagccaaattgaagagtac
atgctgaatttagaaaacttagttcacgaacatgaaagtgacgaaaagaagattgcgata
ttaaaatccgtgtaccgttatgtagagagcttagcttcttaa

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