Vibrio diabolicus: AL552_14900
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Entry
AL552_14900 CDS
T05332
Name
(GenBank) collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
vdb
Vibrio diabolicus
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vdb01002
]
AL552_14900
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
vdb02042
]
AL552_14900
Enzymes [BR:
vdb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
AL552_14900
Peptidases and inhibitors [BR:
vdb01002
]
Metallo peptidases
Family M9
AL552_14900
Bacterial toxins [BR:
vdb02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
AL552_14900
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
PKD_4
PKD
PPC
K319L-like_PKD
Big_9
ChitinaseA_N
Motif
Other DBs
NCBI-ProteinID:
AVF94988
LinkDB
All DBs
Position
1:1251033..1253477
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AA seq
814 aa
AA seq
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MELKILSVAIATTLTSTGVFALSEPVSQVTEQHAHSVHTHGVESNRVEYQPTATLPIQPS
KVTRVQSLESLDESSTACDLEALVTESSNQLISEILSQGATCVNQLFSAESRIQESVFSS
DHMYNIAKHTTTLAKGYTGGGSDELETLFLYLRAGYYAEFYNDNISFIEWVTPAVKESVD
AFVNNANFYENSDRHGKVLSEVIITMDSAGLQHAYLPQVTQWLTRWNDQYAQHWYMRNAV
NGVFTILFGGQWNEQFVQVIGNQTDLAKALGDFALRASSIGAEDEFMAANAGRELGRLTK
YTGNASSVVKSQLSRIFEQYEMYGRGDAVWLAAADTASYYADCSEFGICNFETELKGLVL
SQTYTCSPTIRILSQNMTQEQHAAACSKMGYEEGYFHQSLETGEQPVKDDHNTQLQVNIF
DSSTDYGKYAGPIFDISTDNGGMYLEGAPSQPGNIPNFIAYEASYANADHFVWNLEHEYV
HYLDGRFDLYGGFSHPTEKIVWWSEGIAEYVAQENDNQAALETILDGSTYTLSEIFETTY
DGFDVDRIYRWGYLAVRFMFENHKDDVNQMLVETRQGNWSNYKATITQWANLYQSEFEQW
QQALVSNGAPNAVITANSKGKVGESITFSSENSTDPNGKIVSVLWDFGDGSTSTQTKPTH
QYGSEGEYSVSLSVTDSEGLTATATHSVVISTLGGNDTLPQDCAVQSKVSGGRLTAGEPV
CLANQQTIWLSVPAVNESSNLAITTGNGTGNLKLEYSNSGWPDGTNLHGWSDNIGNGECI
TLSNQSNYWGYVKVSGDFENAAIVVDFDAQKCRQ
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaagattttgagtgtcgcgattgcgacaacgttaaccagcactggcgtattt
gcgttaagcgagccagtttctcaagttacagagcaacatgcacattcggttcatacacac
ggtgttgaatccaatcgagttgaataccaaccaaccgcaactctccctattcagccctcc
aaggtaactcgagtacagtcactcgaaagccttgatgagtcgagcacagcttgtgatttg
gaggcattggttaccgaaagcagtaaccaattgatcagcgaaattttaagtcagggcgcg
acgtgtgtgaaccagttattctctgctgaaagtcggattcaagagtcggtatttagctcc
gatcatatgtacaacatcgctaagcacactacgacattggcgaaggggtatacaggtggc
gggagcgatgaactagaaacgttgttcttatacttacgcgcgggttattacgccgagttt
tacaatgacaacatctcatttattgaatgggtcacccctgcggtgaaagagtccgtggat
gcgtttgttaacaacgcaaacttctacgagaacagcgatcgtcatggcaaagtgcttagt
gaagttatcatcactatggatagtgcgggcttgcagcacgcgtacttaccgcaagtgacc
cagtggcttacacgttggaatgatcaatacgcccagcactggtatatgcgcaatgcggtt
aatggtgttttcactattttgtttggtgggcagtggaacgagcaatttgtgcaagtaatt
ggtaaccaaacagaccttgccaaagctttaggcgattttgctctaagggcgtcatcaatc
ggtgctgaagatgagtttatggccgcgaatgcggggcgagagctcgggcgtctgaccaag
tatacgggtaacgcgagttctgttgtgaagagtcagctgagtcgaatctttgaacagtat
gaaatgtatggtcggggtgacgcggtttggcttgcggcggcggacaccgcctcatattac
gcagattgtagtgagttcggaatttgtaatttcgaaactgagctaaaaggcttggtgcta
tcgcaaacttatacttgtagcccgacaatccgaattttgtctcagaatatgacgcaagag
caacacgcggccgcatgttctaaaatgggttacgaagagggttactttcatcagtcatta
gaaactggtgaacagccagtaaaagatgaccacaatactcagctccaagttaatatcttc
gattcaagcaccgattatggtaagtacgcagggccaattttcgatattagtactgacaat
ggcggtatgtacttggagggtgctccttcccagccggggaatattcccaactttattgct
tatgaagcctcttatgcgaacgcggatcactttgtctggaacctagagcacgaatacgtg
cattacttagatggtcgatttgatctctatggagggtttagtcatccaactgaaaaaata
gtgtggtggagtgaaggcattgcagagtatgtcgctcaagaaaatgacaaccaagcagca
cttgagacgattttagacggctcgacgtataccttaagcgagattttcgagactacttat
gatgggtttgatgttgatcgaatttatcgttgggggtacttagctgtacgttttatgttt
gaaaatcataaagatgacgtaaaccaaatgctggtggaaacacgccaagggaattggagc
aattacaaagcaacgatcacccaatgggcgaatttatatcaaagtgagtttgagcagtgg
cagcaagcccttgtctcaaatggtgcacctaatgcagtcataaccgcaaacagtaagggg
aaagtcggtgaaagcattacatttagcagtgaaaacagtacagacccaaacgggaagatc
gtcagcgtcttatgggacttcggtgatggctcgacaagtacacaaaccaagccgacgcac
caatatgggagtgaaggggagtattcggtcagtctaagtgtgacagacagtgaaggcttg
acggcaaccgccactcatagtgttgttatctcaacgttgggcggtaatgacacattgcca
caagactgcgcggtgcaaagtaaagtaagcggtgggcgcctaacagcaggagagcccgtt
tgcttggcaaatcaacaaaccatttggctgagcgtgccagcggtgaatgagagctcaaat
ctggcgataacgacggggaacggtacgggcaacctaaagcttgaatacagtaactccggt
tggccggatggtactaatcttcacgggtggtcagataatattggtaatggagagtgtatt
acgttgtcaaatcagagtaactactggggctacgttaaagtctctggtgactttgagaat
gccgccattgtcgttgattttgatgctcagaagtgtcgtcagtag
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