KEGG   Vibrio diabolicus: AL552_19145
Entry
AL552_19145       CDS       T05332                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
vdb  Vibrio diabolicus
Pathway
vdb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AL552_19145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vdb03400]
    AL552_19145
DNA repair and recombination proteins [BR:vdb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AL552_19145
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AL552_19145
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA_30 UB2H AAA_22
Other DBs
NCBI-ProteinID: AVF95691
LinkDB
Position
1:complement(2026517..2028547)
AA seq 676 aa
MSKVYELVSDYQPSGDQPGAIKQLLEGLDAGLAHQTLLGVTGSGKTFTLANVIAQAQRPA
ILLAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE
QMRLSATKALLERKDAIIVASVSAIYGLGDPESYLQMMLHLRRGDVIDQRDMLRRLAELQ
YSRNDVAFERGQFRVRGEVIDIFPAESDQDAVRVEMFDDEIDCISVFDPLTGVVKQRDLP
RYTIYPKTHYVTPRDRILEAIENIKVELEVRKKQLLDNNKLLEEQRISQRTQFDIEMMNE
LGFCSGIENYSRYLSGRSEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMYKGDRSRKE
TLVEFGFRLPSALDNRPLKFEEFEALAPQTIFVSATPGNYELEKSSGDVADQVVRPTGLL
DPELEVRPVATQVDDLLSEIRLRSAKDERVLVTTLTKRMAEDLTEYLHEHDVRVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNLEGKAILYADRITNSMKKAMDETNRRREKQKAYNEEMGILPQALKRNIKDIMEL
GDITKSKRQRNTKQVPLSKVAEPSQIYEVMSPQQLEKEISRLEAAMYQHAQDLEFELAAQ
KRDEIEKLRAQFIANS
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgagtaaagtctatgaattggtctccgattatcagccatcgggtgaccagccgggagcg
atcaagcagctgcttgaggggctcgatgctggactggcacatcaaacactattgggggta
acgggatcgggtaaaacgttcacactagcgaatgttatcgctcaagcccagcgacctgca
atattacttgcgccaaacaaaacgctcgcagcgcaattatatggcgagatgaaatcattc
tttcccaataatgcggtggagtactttgtttcctactacgattactaccagcctgaagct
tatgtcccgacgacggatactttcattgaaaaagacgcatcggttaacgctcacatagag
caaatgcgcctttccgcaacgaaagcactattggaacgtaaagacgcgattatcgttgcg
tctgtttctgctatctatggtttgggtgacccagaatcttacttgcaaatgatgttgcat
ttacgtcgtggtgacgtgattgatcaacgggacatgctacgacgtttggcagagctacaa
tattcgagaaatgacgtggcatttgagcgaggacagtttcgggttcgtggcgaagtgatt
gatatctttccagcggaatctgaccaagacgcagttcgtgtcgaaatgtttgatgatgaa
attgactgcatcagtgtttttgatccattgactggtgtggtgaaacagcgagatttacca
cgctacactatttaccctaagacgcactacgtgacaccaagagatcgcattcttgaagcg
atcgaaaatattaaggttgaattagaagtacgcaaaaaacagcttctagacaacaacaaa
ctactggaagaacagcgtattagccagcggactcaattcgatatcgagatgatgaatgag
ttaggtttttgctcaggtatcgaaaactattctcgctatctcagcggacgatcggaaggc
gagccgccaccaacattgtttgattacttgcctcatgacggtttgttgatcatcgatgaa
tcccacgtgactgtgccgcagattggtgccatgtataaaggtgaccgctctcgtaaagaa
acgctggtggagtttggttttcgcttaccttctgcgttagataatcgtccgctcaagttt
gaagagtttgaagcattagcaccgcagacgatttttgtctctgcgacgccaggaaattat
gaactagaaaaatcttcaggcgatgtggcggatcaagttgttcgtccaacaggcttgctt
gacccagaattggaagttcgcccagtagcgacccaagtagacgacttgttgtctgaaatt
cgcctccgttctgctaaagatgagcgagttctagtgacaacattgaccaaacggatggcc
gaagatctcaccgagtacttgcacgaacatgatgttagggtacgttacttacactcagat
attgataccgtagaacgtgtggagatcatccgtgatcttcgtcttggcgagtttgacgtg
ctggtgggaattaacttgctacgagaaggcttggacatgcctgaagtttcgctggttgca
atattggatgcagataaagagggcttcttgcgctccgagcgttcactgattcagaccatt
ggtcgtgctgcgcgaaatcttgaaggtaaggcgattttgtatgctgaccgaatcaccaac
tccatgaaaaaggcgatggatgaaaccaaccgccgccgcgagaagcagaaagcgtacaac
gaagaaatgggcattttgccgcaagcgctcaaacgaaatatcaaagatattatggaattg
ggcgatattaccaagtctaaacgtcagcgtaatactaaacaggtaccgttgtcgaaagtg
gcggagccttcgcaaatatacgaggtcatgtctcctcaacagttggaaaaagaaatcagt
cgacttgaggcggcaatgtatcagcacgcgcaagatttagagtttgaattggcggcgcaa
aagcgtgacgagattgaaaaactaagagcgcagttcatcgcaaatagttaa

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