Vibrio diabolicus: AL552_19620
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Entry
AL552_19620 CDS
T05332
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb00071
Fatty acid degradation
vdb00280
Valine, leucine and isoleucine degradation
vdb00310
Lysine degradation
vdb00362
Benzoate degradation
vdb00380
Tryptophan metabolism
vdb00410
beta-Alanine metabolism
vdb00640
Propanoate metabolism
vdb00650
Butanoate metabolism
vdb00907
Pinene, camphor and geraniol degradation
vdb00930
Caprolactam degradation
vdb01100
Metabolic pathways
vdb01110
Biosynthesis of secondary metabolites
vdb01120
Microbial metabolism in diverse environments
vdb01200
Carbon metabolism
vdb01212
Fatty acid metabolism
Module
vdb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AL552_19620
00650 Butanoate metabolism
AL552_19620
09103 Lipid metabolism
00071 Fatty acid degradation
AL552_19620
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AL552_19620
00310 Lysine degradation
AL552_19620
00380 Tryptophan metabolism
AL552_19620
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AL552_19620
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AL552_19620
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AL552_19620
00930 Caprolactam degradation
AL552_19620
Enzymes [BR:
vdb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AL552_19620
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AL552_19620
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AL552_19620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AVF95773
LinkDB
All DBs
Position
1:complement(2123870..2125981)
Genome browser
AA seq
703 aa
AA seq
DB search
MSEQKAFSLKVDEQNIAWLAIDVPNEKMNTLQAAFADEMKEIFAQLKDASGIKGMIIHSL
KPDNFVAGADVRMLEACTTASEAEALARQGQELFQQLSDLPYPVVAAIHGPCLGGGLELA
LACDYRVCTDSDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAK
KLGVVDACVPDTILLDVAKQFIDKGKNKGTKKLSTKEKVMSGSGLGRKFVFEQAAKKTNQ
KTRGNYPATVAILDVIQHGLEKGFAQGQELEAKRFGELVMSSESKALRSIFFATTEMKKE
NGTDAKPAPVHKVGVLGGGLMGAGISHVSVAKAKVPVRIKDVSNDGVLNALNYNYKLFEK
QRKRRILSKADLQAKMLQLSGGVDFTSFNHIDVVIEAVFEDLDLKQKMVADIEANAKPET
IFATNTSSLPIHKIAEKAERPENVVGLHYFSPVEKMPLVEVIPHETTSDETISTVVALAK
KQGKTPIVVKDKAGFYVNRILAPYMNEAAHILLANEPIEKIDTALLDFGFPVGPITLLDE
VGVDIGAKIMPILVNELGERFKGPDVFDILLNDGRKGRKSGKGFYTYKGKKKDVDKSIYK
LLKLDPESKLSDNDIALRCVLPMLNEAVRCLDDGIIRSPRDGDIGAIFGIGFPPFLGGPF
RYMDQFGIKELVEKMNEFASKYGDRYAPCDGLLTRAGEGTTFY
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaaaaagcatttagtctaaaagttgatgagcagaatattgcttggttagcg
attgacgtacctaatgaaaaaatgaatacgctacaggcggcttttgctgatgaaatgaaa
gaaatctttgctcagctaaaagacgccagtggcatcaaagggatgatcattcattccctc
aaaccggacaacttcgtcgcgggggccgatgttcgcatgctagaagcgtgcacgaccgca
agtgaagcagaagcattagcgaggcaaggtcaagagctattccagcagctatcggactta
ccatatcctgtggttgccgctattcacggtccatgtttgggcggtggcttagagcttgct
cttgcatgtgattatcgtgtttgtacggattcagataaaacgcgtttaggcctgccagaa
gtacaacttggtttattgccaggttctggtggtactcagcgtctgccacgtttgattggc
ctgttaccgtcgttggacttgatcctgacgggtaaacaacttcgtgcgaagaaagctaaa
aaactgggcgttgtggacgcctgtgtccctgacaccattttgctcgacgtagccaaacag
tttatcgacaaaggtaaaaacaagggtacgaaaaagctatcgacgaaagaaaaagtgatg
tcgggtagcgggttagggcgcaagtttgtgtttgaacaggcagcgaagaaaaccaatcag
aaaacccgtggtaactatcctgcaacggtcgcgattttagacgttattcagcatggttta
gagaaaggtttcgcccaaggacaagagcttgaagcgaaacgcttcggtgagcttgtgatg
agctctgaatcaaaagcgctccgttctatcttctttgcgacaacggaaatgaagaaagaa
aatggtacggatgcgaaacccgcgccagttcataaagttggcgtgcttggcggtggcttg
atgggcgcaggaatcagccatgtgtctgttgcaaaagcgaaggtacctgttcgcatcaaa
gacgtcagcaacgatggcgttctaaacgcactcaactacaactacaagttattcgagaaa
cagcgtaaacgtcgcattctatcaaaagccgatctgcaagcgaaaatgttgcaactgtct
ggcggtgtcgattttaccagctttaatcatattgatgtcgtaattgaagccgtttttgaa
gacttagatcttaaacaaaaaatggtggcggatattgaagcgaatgccaagccggaaacc
atctttgcgaccaatacttcttcgttaccaatccacaaaattgcagaaaaagcggagcgt
ccagaaaacgtagtgggtttgcattacttcagcccggtagaaaaaatgccgttggtggaa
gtgattccgcatgaaacgacatcagatgaaaccatttcaacagtcgttgcacttgctaaa
aagcaaggtaaaaccccgatcgtagtgaaagacaaagcgggcttttacgtgaaccgcatt
cttgcgccatacatgaacgaagcggcgcatattctgctggctaacgaacctatcgaaaag
attgatacggcgttgcttgactttggtttccctgtcggcccgattaccttactggatgaa
gtcggggtcgacattggcgcgaagatcatgccgattctggtcaacgagttaggtgagcga
ttcaaaggacctgacgtgttcgatatcttattgaatgacggtcgcaaaggacgtaagagc
gggaaaggtttctacacttacaaaggtaagaagaaagatgtcgataaatccatctacaag
ctgcttaagctcgatcctgaatctaagttgagtgataacgatattgcgttgcgctgtgta
ctaccaatgctgaatgaagcggtacgttgtttggatgacggcatcattcgctcgccacgt
gatggtgatattggtgcaatatttggcattggtttccctccattcttgggcggtccattc
cgttatatggatcagtttggcattaaagaactggttgagaaaatgaatgagtttgcatcg
aagtacggcgatcgttacgcaccgtgtgatggtttgcttactcgagctggagaaggaacc
acattctattaa
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