Vibrio diabolicus: AL552_19845
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Entry
AL552_19845 CDS
T05332
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
vdb
Vibrio diabolicus
Pathway
vdb02020
Two-component system
vdb02040
Flagellar assembly
vdb05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AL552_19845
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AL552_19845
09142 Cell motility
02040 Flagellar assembly
AL552_19845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vdb03000
]
AL552_19845
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vdb02035
]
AL552_19845
Transcription factors [BR:
vdb03000
]
Prokaryotic type
Helix-turn-helix
Other families
AL552_19845
Bacterial motility proteins [BR:
vdb02035
]
Flagellar system
Flagellar assembly proteins
Others
AL552_19845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
bpMoxR
AAA_7
MCM
AAA
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AVF95815
LinkDB
All DBs
Position
1:complement(2170222..2171688)
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AA seq
488 aa
AA seq
DB search
MQGLAKLLVIDDDASSRLNLSNILEFVGENCEAVSSDQLSDVDWSSVWSCCIVGNIPAGQ
AANTVISHLNSAYHIPLLVMGRFPLPVDDLPNFVGELELPLNYPQLSEALRHCKDFLGRK
GVNVVASARKKHAFRSLVGQSRGIQEVRHLIEQVSDTEANVLILGESGTGKEVVARNIHY
HSSYSSGAFVPINCGAIPPELLESELFGHEKGAFTGALTARKGRFELADGGTIFLDEIGD
MPMSMQVKLLRVLQERCFERVGGNSTIKVNVRVVAATHRNLESMIEEGTFREDLFYRLNV
FPIEMPALKERKQDIPLLLQELMTRLEAEGGQPICFTPRAINSLMEHNWPGNVRELANLV
ERMIILYPNSLVDVNHLPTKYRYSDIPEFQPESNPFISVEEQERDVFQDIFSEDFSFDDQ
DDLDHSMNAPQALPPEGVNLKELLADLEVNMISQALEAQGGVVARAADMLGMRRTTLVEK
MRKYNLQR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtttggcaaagctgcttgtaattgatgatgacgcatcaagtcgtttaaattta
agcaatatattggaatttgttggagaaaattgcgaagcggtcagttctgatcagctcagc
gatgttgattggtctagcgtatggtcgtgctgtattgttggtaacattccagcaggtcaa
gcggcgaatacggttatctctcatttaaacagcgcctaccacatcccacttttagtcatg
ggccgatttccgttgcccgtggatgatcttccaaattttgtaggtgagctagaactacct
cttaattacccacagcttagtgaggcgttacgccactgcaaagattttctgggtcgaaaa
ggggtcaatgtcgttgccagtgcacgtaaaaaacacgcttttcgcagcttagttggtcaa
agcagaggtattcaagaagttcgtcacctgatcgagcaagtctcagacactgaggcaaac
gtgttgatcttgggtgaatctggtaccggtaaagaagtcgttgcgcgtaacattcactat
cattcgtcgtacagcagtggtgcctttgtgcccattaactgtggtgccattccaccggag
cttctagaaagtgaattgtttggccacgaaaaaggcgcgtttactggtgcgttaacggca
cgtaaaggtcgatttgagctcgcagacggtggcacgatctttcttgatgagattggcgat
atgccgatgtcgatgcaagtgaagctacttcgcgtattacaagagcgctgcttcgaacgc
gtgggtggcaatagcaccatcaaggtcaatgttcgagttgtcgcggcaacacaccgtaat
ctagaaagtatgattgaagaaggcacgttccgagaagacttgttctatcgtttgaacgtg
tttccaatcgagatgcctgcgctgaaagagcgcaaacaagatattccattgctgctgcaa
gagttgatgacgcgtctggaagcggagggtggccagcctatctgttttacccctcgtgcg
atcaattcactgatggagcacaactggccgggtaacgtgcgtgagttagccaaccttgtt
gagcgaatgatcattctgtacccaaatagcttggtcgatgtaaaccacttaccaaccaaa
tatcgctacagtgatatcccggagttccaaccagaaagtaatccgtttatttcggttgaa
gaacaagagcgtgatgtgttccaagacatcttctcagaagactttagctttgatgatcaa
gacgatcttgaccacagcatgaacgctccgcaagcgctgccgcctgaaggtgtaaatctg
aaagagctgttggctgatttagaagttaatatgatcagccaagcgttagaagcacaaggt
ggagtcgtggcacgagccgctgatatgctgggtatgcgacgtacaacgttggtggaaaaa
atgcgtaagtacaacttacaacgctag
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