Vibrio diabolicus: AL552_19920
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Entry
AL552_19920 CDS
T05332
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb00300
Lysine biosynthesis
vdb01100
Metabolic pathways
vdb01120
Microbial metabolism in diverse environments
vdb01230
Biosynthesis of amino acids
Module
vdb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AL552_19920 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vdb01002
]
AL552_19920 (dapE)
Enzymes [BR:
vdb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
AL552_19920 (dapE)
Peptidases and inhibitors [BR:
vdb01002
]
Metallo peptidases
Family M20
AL552_19920 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AVF95829
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All DBs
Position
1:2182595..2183731
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AA seq
378 aa
AA seq
DB search
MTDSPVLALAKDLISRQSVTPEDAGCQDLMIERLKALGFEIEVMVFEDTTNFWARRGSEA
PLFAFAGHTDVVPAGKLEHWDTHPFEPTIIDGYLHGRGAADMKGSLAAMVVAVERFIAEN
PDHKGSIGFLITSDEEGPFINGTVRVVETLMARGENIDMCIVGEPSSTEVVGDVVKNGRR
GSITGDLTVKGTQGHVAYPHLANNPVHESLLAIHELATTEWDKGNDYFPPTSFQIPNVSA
GTGASNVIPGEFHVQFNLRFSTELNNDAIVQRVTETLDKHELDYDLKWTFNGDPFLTDTG
ALLDAVVAAVADVNDTKPALLTTGGTSDGRFIARMGGQVVELGPVNATIHKVNECVKVDD
LEKLTDMYENTLKHLLAK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacagacagtccagtattggcacttgctaaagatctgatcagtagacagtccgtaacg
ccggaagacgcaggttgtcaggatttgatgatcgagcgcttaaaagcactcgggtttgaa
attgaagtgatggtatttgaagacaccacaaacttctgggctcgacgtggttcagaagcg
ccgctatttgcgtttgctggccacaccgatgtggtacctgctggcaaactggagcactgg
gatacacatccgtttgaaccaactattattgatggttacctacacggtcgcggtgcagcg
gacatgaaagggtcgctagctgctatggtcgttgctgtcgaacgcttcattgcagaaaac
ccagaccacaaaggctcaatcggctttctaattacgtcggatgaagaaggaccatttatc
aatggtaccgttcgtgttgtagaaacgttgatggcacgtggcgaaaatatcgacatgtgt
atcgtcggtgaaccatccagcaccgaagtggttggcgatgtggtgaaaaatggacgtcgc
ggttctatcacgggcgatttaacggtaaaaggaacacaaggccacgtggcctatcctcac
ctagccaataaccctgtgcacgagtctctactcgcgattcatgaactcgcaacaacagag
tgggacaaaggaaatgattatttcccaccaaccagcttccagatcccgaacgtatcggct
ggcactggtgcgtctaacgtcattcctggcgagttccatgttcagttcaacctacgtttt
agtactgagcttaacaatgacgcaattgttcagcgtgttaccgaaacactagacaagcat
gagctggactacgacctaaaatggacattcaacggcgacccattcctgaccgatacaggc
gcgctgctagatgcggttgttgctgctgttgccgacgtgaatgatacgaagccagcacta
cttacaactggcggtacatctgatggtcgctttattgctcgaatgggtggtcaagtcgta
gagttaggccctgtgaatgctacgattcataaagtgaacgaatgcgtgaaagtggacgat
ctagaaaagttgactgacatgtacgagaacacgttgaaacacctgttagcgaagtaa
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