Vibrio diabolicus: AL552_20050
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Entry
AL552_20050 CDS
T05332
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb03030
DNA replication
vdb03430
Mismatch repair
vdb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL552_20050
03430 Mismatch repair
AL552_20050
03440 Homologous recombination
AL552_20050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vdb03032
]
AL552_20050
03400 DNA repair and recombination proteins [BR:
vdb03400
]
AL552_20050
Enzymes [BR:
vdb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL552_20050
DNA replication proteins [BR:
vdb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AL552_20050
DNA repair and recombination proteins [BR:
vdb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AL552_20050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AVF95854
LinkDB
All DBs
Position
1:complement(2208153..2208875)
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AA seq
240 aa
AA seq
DB search
MNTSSNSEYNRIVVLDTETTGMNREGGPHYMGHRIIEIGAVEIINRKLTGRHFHVYLKPD
REIQPEAVEVHGITDEFLVDKPEYASVHQEFLEFIKGAELVAHNAPFDTGFMDYEFGMLD
PNIGKTDDYCKVTDTLAMAKKIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVY
LFMTGGQTSLEFNANKQEGGVETIRRIEGRKALKVLRASADELEAHQKRLELVNDCIWHQ
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaataccagcagcaattctgaatataaccgcattgtcgttctcgataccgaaaccaca
ggtatgaaccgcgagggtggtcctcactacatgggacaccgcattattgaaatcggtgcc
gtggagatcatcaaccgtaagctgactggtcgtcacttccacgtttatttaaaacccgat
cgtgaaatccaaccagaagcggttgaagttcacggtattacggatgaattcttggttgat
aaaccggaatacgcgagcgtgcaccaagagtttcttgagtttattaaaggcgcagaactt
gttgcccacaacgcacccttcgatacgggctttatggattacgagtttggcatgctcgat
cccaacatcggcaaaacggacgactactgcaaggtgaccgatacccttgctatggcgaag
aaaatcttccctggcaagcgaaacaaccttgatatcttatgtgaacgctacggtattgat
aactcgcaccgtacactccacggagctttgctcgatgctgagattctagccgacgtttac
ctctttatgacgggtggtcaaacgagtctagaatttaacgcgaataaacaagagggtggg
gtagaaaccattcgccgtattgaaggaagaaaagcgctaaaggttttgcgcgcaagtgcc
gatgaactagaagctcaccaaaaaagattagagttggtgaacgactgtatttggcatcaa
tag
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integrated database retrieval system
