KEGG   Vibrio diabolicus: AL552_20610
Entry
AL552_20610       CDS       T05332                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vdb  Vibrio diabolicus
Pathway
vdb03030  DNA replication
vdb03430  Mismatch repair
vdb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AL552_20610
   03430 Mismatch repair
    AL552_20610
   03440 Homologous recombination
    AL552_20610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vdb03032]
    AL552_20610
   03400 DNA repair and recombination proteins [BR:vdb03400]
    AL552_20610
Enzymes [BR:vdb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AL552_20610
DNA replication proteins [BR:vdb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AL552_20610
DNA repair and recombination proteins [BR:vdb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AL552_20610
SSDB
Motif
Pfam: RNase_T DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: AVF95953
LinkDB
Position
1:complement(2323460..2324164)
AA seq 234 aa
MFGYSFQSIEHLEHVRRELEKSSLPDVFNSIGNTPLPGALSDARELDTLVLDFETTGFNP
EVDRVISIGWVEIRNSNIRLNSARHIFINHAIDICHESVKVHHIRPETLHVSGISEQVAF
TQLLDVIAGKILVAHGCIMEQRFLEQYIKMKYQNLKLPLIWLDTLKIEQYRTQLRPTRSD
WRLSSIRKELNLPTYQAHNALNDAIATAELYLAQINCLFGLSSAPLHVLVNASR
NT seq 705 nt   +upstreamnt  +downstreamnt
atgtttggctactcattccagtcaattgaacatctagaacacgtgcgcagagagctagaa
aaatctagcttgccagatgtatttaactctataggaaatacgcctctacctggagcttta
tcggacgctagagagttagacacgttagtcttggactttgaaacgacaggatttaatcct
gaagtagatagagtaatcagtattggatgggtcgaaattcgaaacagcaatattcgtcta
aatagtgcacgtcatatcttcattaatcatgcaattgatatttgtcatgagtcagtcaaa
gttcaccatatcaggcctgaaacgttgcatgtatcggggatttcagaacaagttgctttc
actcagttgctggatgtaattgctggtaaaattcttgttgcacatggctgcattatggag
cagaggtttttagagcaatacatcaagatgaagtaccagaatttgaagttgccattaata
tggttagatacattaaaaatcgagcaatatcgcacccaactgagacctactcggtctgac
tggcggttaagttcaattcgaaaggaactcaacctaccaacatatcaagcccataacgca
ctaaatgatgcgatagcgactgccgaactatatctagcacagattaattgcttgtttggc
ctttcatctgcgccattacatgttttagttaatgcttcgcgctaa

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