KEGG   Vibrio diabolicus: AL552_20780
Entry
AL552_20780       CDS       T05332                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
vdb  Vibrio diabolicus
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vdb03400]
    AL552_20780
DNA repair and recombination proteins [BR:vdb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AL552_20780
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB ChlI DnaB_C Lon_C DUF7125 GvpD_P-loop Rad51 SLFN-g3_helicase AAA AAA_22 RecA_N AAA_16 ABC_tran AAA_14 nSTAND_NTPase5 NTPase_1 nSTAND3 AAA_24 zinc_ribbon_6 Zeta_toxin Zn_ribbon_8 AAA_29 Viral_helicase1 AAA_5 cobW Zn_ribbon_Thio2
Other DBs
NCBI-ProteinID: AVF95984
UniProt: A0A2L2K828
LinkDB
Position
1:complement(2362024..2363403)
AA seq 459 aa
MAKAKRAYVCNDCGADFPRWQGQCNACGSWNTITEVRIAASPTVARNERLSGYAGSATEA
TVQTLSEIDLQEVPRFTSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCSLSA
QMPTLYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDKICQIAEKEQPRIMVIDSIQV
MHVSDVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRPLPKDVVIFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPAANMPKGGIPGMQIHGVKKLSEAIEAFDEL
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggcgaaagcaaaacgagcgtatgtttgtaatgattgtggcgcggattttccccgttgg
caggggcagtgtaacgcatgtggttcgtggaatacgataacagaagtccgtatcgctgca
tcgccaacggttgctcgtaatgaacgtttatccggctacgcgggctccgcaacagaagct
acagttcaaacgttatccgaaattgatctgcaggaagtgccacgcttcaccagtgggttt
aaagaacttgaccgcgtattaggtgggggcgttgtacccggcgccgctattttgattggt
ggtaaccctggcgctggtaaatccaccttgttgctgcaaaccatgtgtagtttgtctgcg
caaatgccaacgctctacgtaacaggtgaagaatcgttgcagcaggtagcaatgcgtgct
tctcgactagggttgccgaaagagcacttaaaaatgctatcggaaacgaacgtcgacaaa
atttgccaaatcgccgaaaaagagcaacctcgcattatggtgattgactcgattcaggta
atgcacgtttcagatgttcaatcgtcaccgggcagtgttgctcaagtacgtgaatctgcg
actgctctgacacgatacgcaaaacagaataacgtcgcggtatttattgttggtcacgta
acaaaagatggtacccttgcgggccctaaagttcttgagcacattatagactgttcagtg
ctgcttgatggtggtactgatagccgctttcgcacattgcgtagtcataaaaaccgcttt
ggcgctgtgaatgagctcggtgtctttgcaatgacaggccaagggttgaaagaagtgagt
aacccatccgcgattttcctttctcgtggtgaagaagaaacatcaggttcttctgttatg
gtcgtgtgggaaggtacgcgtcctctattagtagagattcaagcgttggtggattactcg
caattggcaaaccctcgccgtgttgcggtcggtttggagcagaaccgcttatcacttttg
ctcgctgtgttgcataagcatggtggcttacaaatggcagaccaagatgtctttgttaat
gtggttggcggtgttaaggtgacggagacgagtgccgatcttgcgttagttatggcgctt
ttatcgagttttcgtgaccgtccacttcccaaagatgtggttatttttggtgaggtcggg
cttgcaggcgaaatccgtcctgtgccaagtgggcaagaacgtttgaatgaagcgttcaaa
catggtttcaagaaagccattgtgcctgcagccaacatgccgaaaggcggcattcctggc
atgcaaattcacggcgttaagaaattgtcggaagctatagaggcttttgacgagctgtaa

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