Vibrio diabolicus: AL552_20915
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Entry
AL552_20915 CDS
T05332
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vdb
Vibrio diabolicus
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vdb03016
]
AL552_20915
Enzymes [BR:
vdb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AL552_20915
Transfer RNA biogenesis [BR:
vdb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AL552_20915
Prokaryotic type
AL552_20915
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AVF96006
LinkDB
All DBs
Position
1:complement(2389959..2390912)
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AA seq
317 aa
AA seq
DB search
MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETRPVDVTLDKLEACIDKFRGESDQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEIVLHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTGVAKYPYEKMVTLEQLNELLEQAHREELAPRELLDPLL
LPMDTAVEDLPEVNLVPELADMVQHGQPVQVFGAPTEGSLRLTMGEERLFIGVGEMNEDG
KIAPKRLVVFRDDVASK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgtccaattaatggcgttatactgttggacaaaccaaca
ggcatctcttccaatgatgcactgcaaaaagtaaagcgaatctactttgctgagaaagca
ggccacactggtgccttggacccattagcgacaggcatgctgccaatttgcttgggtgaa
gcgacgaagttttctcagtttcttctagattctgataaacgctaccgtgtgatcgcaaag
cttggtgaacgtaccaacacgtctgactcggatggtgaagttgtagagacgcgtccagtc
gatgttacgttagacaagctagaagcgtgcatcgataagttccgtggtgaatctgatcaa
gtgccttccatgttctctgcgttgaagtatcaaggtaaacccttgtatgaatacgctcgt
aaaggcatcgaagttccgcgtgaatctcgtaagatcacggtatatgagattgttcttcac
cgttttgaaggcgatgaagtcgagatggaagtgcattgctcaaaaggcacctacattcgt
accatcgtggatgacctaggcgaaatgttaggttgtggtgcgcacgtaactatgcttcga
cgcactggtgttgcgaaatacccttacgagaagatggtgacacttgagcaactgaatgag
ttactagagcaagcacaccgtgaagaactcgctcctcgagaactactggacccattgctg
ttaccaatggatacagcggtagaagacttaccagaagtcaacttagtgcctgaactggcg
gatatggttcagcatgggcaacctgttcaagtatttggtgcgcctaccgaaggctcactt
cgccttaccatgggtgaagagcgtttgtttattggcgttggcgaaatgaacgaagatggc
aaaatcgctcctaagcgattggtcgtgttccgagatgacgtcgcatccaagtaa
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