Vibrio diabolicus: AL552_21220
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Entry
AL552_21220 CDS
T05332
Name
(GenBank) LuxR family transcriptional regulator
KO
K10913
TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
Organism
vdb
Vibrio diabolicus
Pathway
vdb02020
Two-component system
vdb02024
Quorum sensing
vdb05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AL552_21220
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AL552_21220
05111 Biofilm formation - Vibrio cholerae
AL552_21220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vdb03000
]
AL552_21220
Transcription factors [BR:
vdb03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
AL552_21220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
DUF3755
Radial_spoke_3
TetR_C_11
HTH_7
LacI
Motif
Other DBs
NCBI-ProteinID:
AVF96061
LinkDB
All DBs
Position
1:2466957..2467571
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AA seq
204 aa
AA seq
DB search
MDSIAKRPRTRLSPIKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTR
EDLVDEVLNHVVRQFSNFLSDNIDLDLHARENIANITNAMIELVSQDCHWLKVWFEWSAS
TRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSEHLANLFHGICYSLFVQANRA
KSEAELKYLVSSYLDMLCIYNREH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggactcaattgcaaagagacctagaactaggctttccccgatcaaacgtaagcaacag
ttaatggaaatcgcattggaagtgtttgcgcgccgcggcatcggtcgtggtggtcacgca
gatatcgcagaaattgctcaagtttctgtggcgaccgtttttaactacttcccgactcgt
gaagacttagtggatgaagtactcaaccacgtcgtacgtcagttctcgaacttcctatcg
gataacattgacttagacttacacgcgcgtgaaaacatcgccaatattactaatgcgatg
attgagcttgtcagccaagattgtcactggctaaaagtttggttcgagtggagcgcttca
acacgtgatgaagtatggccattgtttgtttcaactaaccgtactaaccagttgctggta
caaaacatgttcattaaagcaattgaacgtggcgaagtatgtgaccagcacgattcagaa
cacttggcaaacttgttccacggtatttgttactcactgtttgtccaagcgaaccgtgca
aaaagtgaagcggaacttaagtaccttgttagttcatacttagacatgctttgcatttac
aaccgtgaacactaa
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