Vibrio diabolicus: AL552_21455
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Entry
AL552_21455 CDS
T05332
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
vdb
Vibrio diabolicus
Pathway
vdb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AL552_21455 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vdb03400
]
AL552_21455 (mutS)
DNA repair and recombination proteins [BR:
vdb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AL552_21455 (mutS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
ZapD
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AVF96097
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Position
1:2509355..2511916
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AA seq
853 aa
AA seq
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MKAEQKHTPMMQQYLKLKAENPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGSSAG
EPIPMAGVPFHAVEGYLAKLVQLGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDEA
LLSERVDNLIAAIYHHNGKFGYATLDVTSGRFQLTEPETEEAMTAELQRTAPRELLFPED
FEPVHLMASRNGNRRRPVWEFELDTAKQQLNQQFGTKDLVGFGVEHASLGLCAAGCLIQY
VKDTQRTALPHIRSLTFDHQDQSVILDAATRRNLEITQNLAGGTDNTLAAVLDHCATPMG
SRMLKRWLHQPMRCIETLNNRLDAIGEIKEQALFADLQPTLKQIGDIERILARLALRSAR
PRDMARLRNAMQQLPELESVTASLTHPYLAKLAQYAAPIDEVCDLLERAIKENPPVVIRD
GGVIAEGYNAELDEWRKLADGATEYLEQLERDERERHGIDTLKVGYNNVHGFFIQVSRGQ
SHLVPPHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALALEKQLWEELFDLLMPNLEK
LQNLASALSQLDVLQNLAERADSLDYCRPTLVKDAGIHIQAGRHPVVEQVTTEPFIANPI
ELNPARKMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESAQIGSLDRIFTRIGASD
DLASGRSTFMVEMTETANILHNATKNSLVLMDEIGRGTSTYDGLSLAWASAEWLATQIGA
MTLFATHYFELTELPNQLPNLANVHLDAVEHGDSIAFMHAVQEGAASKSYGLAVAGLAGV
PKTVIKNARNKLSQLEQLGQNSDTPRPSAVDVANQLSLIPEPSEVEQALSGIDPDDLTPR
QALEELYRLKKML
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagctgaacaaaaacacactccgatgatgcagcaatacctcaagctaaaagctgag
aaccctgagattttgctgttctaccgcatgggcgatttctacgaactcttttacgatgat
gcaaagcgagcgtcccaactgcttgatatttcgctaactaagcgcggttcgtcagctgga
gagcctattcctatggcgggagtgccatttcacgcagtagaaggctatctagcaaaactt
gttcagcttggtgaatcagtcgcaatctgcgaacaaattggcgatccagccaccagcaaa
ggtccggtagaacgtaaagttgtgcgtattgtgacaccaggcactgttactgatgaagca
ttgctttctgagcgtgtcgataacttaatcgcagccatttaccatcacaacggtaagttc
ggttatgcgacgctggatgtcacttctggtcgcttccaactgacagaaccagaaaccgaa
gaagcgatgacagccgagcttcagcgtaccgcaccacgtgagctactattcccagaagat
tttgaacctgtacatttaatggcgagccgcaatggtaaccgtcgtcgcccagtatgggag
tttgagcttgatacggctaagcaacaactcaatcaacagtttggcaccaaagatttggtt
ggttttggcgtagaacatgcatccctagggttatgtgctgctggttgtttgatccagtat
gtgaaagatacacaacgtacggctttacctcatattcgctctttaacgtttgatcatcag
gaccaatccgtcattcttgatgccgctacccgacgcaacctggaaattactcaaaatcta
gcaggcggaaccgataacacgctagctgcggtactcgaccattgtgcgacgccgatgggc
agccgaatgctgaagcgttggttacatcagcctatgcgttgcattgaaacgttaaacaat
cgtcttgatgcgattggtgagattaaagaacaagcgctgtttgccgatcttcaaccaacg
ttaaaacaaattggtgatattgaacgtatcttagcacgccttgcactacgctctgctcgc
cctcgcgatatggctagacttcgcaatgccatgcagcagctaccagagctagaatctgtc
accgcttctttgacccatccatacctagcaaaactggcgcaatacgcagctccgattgac
gaagtatgtgatctgttagagcgtgcaattaaagaaaatccgccggttgttattcgtgat
ggtggtgtgatcgctgaaggctataatgccgagctcgatgaatggcgcaaattagcagac
ggtgcaacagaataccttgagcagcttgagcgagatgagcgtgaacgacacggcatcgat
acgcttaaagtcggctacaacaacgtacatggcttctttattcaagtgagccgtggccag
agccatttggttccaccgcactatgtacgtcgccaaacactaaaaaatgccgaacgctat
atcatcccagagctcaaagagcacgaagacaaagtacttaactcgaaatcgaaagcgctg
gcacttgaaaagcagctgtgggaagaactgtttgatctattgatgccaaatctggagaag
ctgcagaatttagcttctgctctgtctcaactcgatgtactacaaaacctagcagagcgt
gcagattcgttggattactgccgaccaacgcttgtgaaagacgctggcattcacattcaa
gcgggtcgtcacccagtcgtagagcaagtaacaacagaaccgttcattgcgaacccaata
gagcttaacccagctcgtaagatgttgatcatcaccggtccaaacatgggtggtaaatcc
acctacatgcgtcaaactgcgctgattgcattgatggcacatatcggctcttatgtacct
gcagaatctgcacaaattggttctttagatcgtatatttactcgtattggagcgtcagat
gatctcgcatctggtcgttctaccttcatggtagaaatgacggaaaccgctaatattctg
cacaatgcaactaaaaacagtttagtgctaatggatgaaatcggtcgcggtaccagtact
tacgatggcctatctttagcttgggcaagtgcggaatggctcgcaacacaaattggtgcg
atgacactatttgcaactcactacttcgaattgacagagttgccaaaccaactgccaaac
ttagcgaacgttcacttggatgccgtagaacatggtgacagcattgcctttatgcacgca
gttcaagaaggtgcggcaagtaagtcttacggcttggctgttgcgggcttagctggcgta
ccaaaaacggtcatcaaaaatgcgcgtaacaagctatctcagctagagcaactggggcaa
aacagtgacacaccgcgtccaagtgcagtagatgtggctaaccagttgagcctgattcca
gagcctagcgaggtcgaacaagctctgtcaggtattgatcctgacgacttaacgccacgc
caagctcttgaagagctgtatcgcttgaagaagatgctgtaa
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