Vibrio diabolicus: AL552_21550
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Entry
AL552_21550 CDS
T05332
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
vdb
Vibrio diabolicus
Pathway
vdb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AL552_21550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vdb03400
]
AL552_21550
DNA repair and recombination proteins [BR:
vdb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AL552_21550
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AL552_21550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AVF96115
LinkDB
All DBs
Position
1:complement(2530523..2531254)
Genome browser
AA seq
243 aa
AA seq
DB search
MSNLSSEGLQRCFVLHRRPYSESSLILDVFSEEYGRMTLMAKGARSKRSNLKGALQPFTP
LLLKWSGKGSMKTLRQAEPISLGLPLTGINLYSAMYVNELIGRILMAEVPMPALFHDYLH
ALTELAHNENPEPALRRFELALLSSMGYGVDFLHCAGTGEPVDPEMTYRYREQKGFIASV
RRDNLTFLGNELIAISERRFVTKEQLKAAKRFTRIALKPYLGGKPLKSREFFIQTPRARS
NGK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatctgtcttccgaaggtttacagcgctgttttgttttacatcgccgcccttac
agtgaatcgagcttaatccttgatgtatttagtgaggaatatggccgaatgactttaatg
gccaaaggcgcgcgcagtaagcgttcgaacttaaaaggcgcattgcaaccttttactccg
ctgttacttaaatggtcgggaaaaggttcaatgaagactttgcgtcaagctgagccgata
agcctaggtttaccgttaacgggcattaatctctactcagccatgtacgtcaatgaactg
attggccgtatcttgatggctgaagtgccaatgccagcgctatttcatgattatttgcat
gcgttaacagagttggcacacaacgagaaccctgagccagcactgcgtcgttttgagtta
gcattgctctcttctatggggtatggcgtggatttcttgcactgtgcaggtactggcgag
cccgtcgacccagagatgacgtatcgttaccgggaacaaaaaggcttcatagcttcggtt
aggcgcgataaccttacgtttttagggaatgagctgattgctatcagtgagcggcggttc
gtcactaaagagcagctaaaagcggcaaaacgctttacacgtatagccttaaagccgtat
cttggcggcaaacctttaaaaagtcgtgaatttttcattcagacccccagagcacggagt
aacggaaaatga
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