Vibrio diabolicus: AL552_21915
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Entry
AL552_21915 CDS
T05332
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb00250
Alanine, aspartate and glutamate metabolism
vdb00310
Lysine degradation
vdb00350
Tyrosine metabolism
vdb00650
Butanoate metabolism
vdb00760
Nicotinate and nicotinamide metabolism
vdb01100
Metabolic pathways
vdb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
AL552_21915 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AL552_21915 (gabD)
00310 Lysine degradation
AL552_21915 (gabD)
00350 Tyrosine metabolism
AL552_21915 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
AL552_21915 (gabD)
Enzymes [BR:
vdb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
AL552_21915 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
AL552_21915 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
AL552_21915 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
DUF3987
Motif
Other DBs
NCBI-ProteinID:
AVF96849
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Position
1:complement(2587753..2589186)
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AA seq
477 aa
AA seq
DB search
MQQIKNETLKSVLKQWSSEEGIVVINPATEQELVRLKPSALEELDDIIGKCKTEQIRWAK
LSAKERSRRLKKWYQLLLDNAEDIATIITLEQGKPLTESKGEVMYGASFVEWFSEEAKRA
YGEVIPAPTTDRRLSAIRQPVGVCAAITPWNFPIAMITRKAAPALAAGCGMLIKPSELTP
LTAIAVVELAYQAGIPKELLPVVVSEQAAEFGQVLSTDPRIKKVSFTGSTRVGKILMKQA
SDSVKAVSMELGGNAPFIVFEDADLDAAAEGLVASKFRNAGQTCVCTNRLYIHEDVKQAF
IEKVLSKLNKLQLGNGLEKGVTLGPVITMASKHRLEAVIDQAVQEGASIANSPQRRPGRF
MEPVLLDSVKQHMSIVQQELFGPVLPIITFENDEQVLGMANDTEYGLACYFYTNNFKRIV
AFSEGLEYGMVGVNEGIISTEVAPFGGVKESGVGREGAKQGLDEYLETKYICLGGLS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaataaaaaatgaaaccttgaaatccgtacttaagcaatggtcttccgaagag
ggaattgtggtcatcaaccctgcaactgagcaagagttagttcgattaaagcccagtgct
cttgaggaattagatgacattattggtaagtgtaaaaccgagcaaattcgctgggcaaag
ttaagtgccaaagagcgctctcgtcgcttgaaaaagtggtatcaattactccttgataat
gcagaagacattgccacaattattaccttagagcaggggaaaccattaaccgagagtaaa
ggggaggtgatgtatggcgcctcttttgtcgagtggttctcagaagaagccaaacgtgct
tatggcgaagttatacctgcacccacgacagatcgacgtctgtctgctattcgccagcct
gtaggggtatgcgctgcaattacgccgtggaacttccctattgcgatgattacaagaaaa
gcagcaccagccctggcggcaggctgtggtatgctgattaaaccctctgagcttacccct
cttactgcaattgctgttgttgaattagcttatcaggcaggaatcccaaaagaactgctt
cctgtggtggtatcagagcaggctgctgagtttggccaagtactaagtactgatcctagg
attaagaaagtttcttttacgggctctacgcgagtcgggaagattttgatgaaacaagcc
agtgactctgtcaaagcggtttcgatggagttaggtggtaatgcaccttttattgttttt
gaagatgcagatttagatgcggctgcggaagggcttgtcgcttcgaagttccgtaatgca
gggcaaacatgtgtttgtaccaatcggctgtatatccatgaagatgtaaaacaagctttt
attgaaaaagtattgtcgaagttaaacaaattacagcttggtaatggtttagagaaaggt
gtcacattaggccctgttattacgatggcttctaaacatcgcctagaggcggtgatcgat
caagctgtacaagaaggggcttctattgccaactctccgcagagacgccctgggcgcttt
atggagcccgttcttttggatagcgtcaagcagcatatgtcgattgttcagcaagagcta
ttcgggcctgtattacctattattacctttgagaatgatgagcaagttctcggaatggcg
aatgacacagagtatggtttggcttgttacttctacacgaataacttcaagcgtattgtt
gctttcagcgaaggtctggaatacggcatggttggtgtcaatgaggggattatttctact
gaggtggccccgtttggtggagtgaaagagtcaggagttggccgagaaggtgcgaaacaa
gggctcgatgaatatttggagacaaagtatatttgtctcggtggtttaagctga
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