Vibrio diabolicus: AL552_23625
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Entry
AL552_23625 CDS
T05332
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vdb
Vibrio diabolicus
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vdb03016
]
AL552_23625 (trmA)
Enzymes [BR:
vdb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
AL552_23625 (trmA)
Transfer RNA biogenesis [BR:
vdb03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
AL552_23625 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
MTS
Cons_hypoth95
Methyltransf_31
Methyltransf_12
Methyltransf_15
Methyltransf_11
PrmA
TRM5-TYW2_MTfase
DREV
DUF6579
Motif
Other DBs
NCBI-ProteinID:
AVF96442
LinkDB
All DBs
Position
1:2939233..2940342
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AA seq
369 aa
AA seq
DB search
MATLDVNPQRYQEQLAEKVERLTDMFAPYNMPELEVFESPEQHYRMRAEFRVWHEGEDLY
YIMFNQETREKYRVDQFPAASRLINDLMPLLVEAMKDNDSLRRKLFQVDFLSTLSGEILV
SLLYHRQLDEEWIENAKALKQRLNDEGFNLNIIGRARKMKIVLDRDYVIEKLDVNGQSYI
YQQVENSFTQPNGKVAEKMLEWAVDCTQESTGDLLELYCGNGNFSLALAQNFDRVLATEL
AKPSVVSAQYNIAANKIDNVQILRLSAEEFTQAIEGKREFRRLQDNGVDLKSYNCNTIFV
DPPRAGMDVDTCKMVQGYERIMYISCNPETLKENLDILCETHNVTRFALFDQFPYTHHME
AGVLLERIK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggctactcttgatgtaaatccacaacgctaccaagaacaactggctgaaaaagtcgaa
cgtctcacggatatgttcgcgccatacaacatgccagaactggaagtgtttgaatcacca
gagcagcattaccgcatgcgtgctgagttccgtgtttggcatgaaggcgaagatctttac
tacatcatgttcaaccaagaaactcgtgagaagtaccgtgttgaccaattccctgcagca
agccgtctgatcaacgacctgatgccgctattggttgaagcgatgaaagacaacgactcg
ctacgtcgtaaactgttccaggtggatttcctatcgacgctaagtggtgagattctggtt
tcactcctttaccatcgccaacttgatgaagagtggattgaaaacgcgaaagcccttaaa
cagcgcttaaatgatgaaggcttcaacctaaacatcattggtcgtgctcgtaagatgaag
attgtcctagaccgcgactacgtgatcgagaagctcgatgtaaatggtcaaagctacatc
taccaacaagtagagaacagcttcactcagccgaacggcaaagtcgcagagaagatgctg
gaatgggcggtcgactgcacccaagaaagcactggcgacctactagaactttactgtggt
aacggtaacttctcgctggccttggcacagaatttcgaccgcgtcctagcaactgagcta
gcgaagccatctgtggtatctgcacagtacaacatcgccgccaataagattgataacgta
caaatcttacgtctatcagcagaggaatttactcaagcgatcgaaggtaagcgtgaattc
cgtcgtctacaagacaatggtgtggatctgaagagctacaactgcaacacgatttttgtc
gacccaccacgtgctgggatggatgtcgatacttgtaaaatggtgcaaggttacgagcgc
atcatgtacatctcttgtaaccctgagactctaaaagagaacttggacattctatgcgaa
acacacaacgtgacgcgttttgctctgtttgaccaattcccttatacccaccacatggaa
gcaggtgtactgctagagcgcattaagtaa
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