KEGG   Vibrio diabolicus: AL552_23965
Entry
AL552_23965       CDS       T05332                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
vdb  Vibrio diabolicus
Pathway
vdb00300  Lysine biosynthesis
vdb00470  D-Amino acid metabolism
vdb01100  Metabolic pathways
vdb01110  Biosynthesis of secondary metabolites
vdb01120  Microbial metabolism in diverse environments
vdb01230  Biosynthesis of amino acids
Module
vdb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AL552_23965 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AL552_23965 (lysA)
Enzymes [BR:vdb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     AL552_23965 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AVF96504
LinkDB
Position
1:complement(3006452..3007705)
AA seq 417 aa
MDYFNYQDDGQLWAEDVPLQALAEQYGTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAV
KANSNLGVLNALARLGSGFDIVSGGELERVIAAGGDPKKVVFSGVGKTPAEMKRALELGI
KCFNVESEPELERLNKVAGELGVIAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP
DVYKFAQSLPNLNVQGIDCHIGSQLTNIDPFIDATDRLLALIDDLKAQGINIRHLDVGGG
LGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANAGILLTRVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVSPRTGEAQTYDLVGPICETGDFLGKDRALVLQE
GDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGKQSHLVRQREELTSLWQLEQILPE
NT seq 1254 nt   +upstreamnt  +downstreamnt
ttggattacttcaactatcaggatgatggccagctttgggccgaagacgtcccacttcaa
gctcttgcagagcaatatggcactcctctttacgtatattctcgagccacgctagagcgc
cactggaaggcgtttgatagtgctgtgggtcaacatcctcatctagtttgctacgcggtg
aaagcgaactcaaacctaggcgtattgaacgcactggcgcgtttgggttcgggctttgat
atcgtatcaggtggtgaacttgagcgtgtgattgccgcaggcggtgatccgaagaaagtc
gtcttctcgggtgttgggaaaacacctgcagaaatgaagcgtgctcttgagctaggtatc
aaatgtttcaacgttgaatctgagcccgagctagaacgtttgaataaggttgcgggtgag
cttggtgtgattgcgccaatttctctgcgtatcaatccagatgtcgacgcgaaaacacac
ccttacatttcgactggtcttcgcgacaataaattcggcattgcatttgatcgtgcgcca
gatgtttataaattcgcgcaaagcctgccgaacttgaatgtgcaaggcatcgactgccac
attggttctcagctcaccaatatcgacccatttatcgacgcgacagaccgtttattagcc
ctgattgatgatttaaaagcgcaaggcattaacattcgtcaccttgatgtcggcggcggt
ttgggtgtggtctatcgtgatgaattaccacctcagccttcagattacgcgaaagcgtta
ctaggccgtcttgaaaatcaccaagacttggagctgatttttgagccgggccgagcaatt
gctgcgaatgcaggtatcttgctaacgcgtgttgagtttttaaaacatactgagcacaag
aactttgccatcatcgatgcggcaatgaacgacttgatgcgtcctgcactataccaagca
tggcaagatatcgtgccagtttcgccgcgcacgggtgaagcacagacttacgatttggtt
ggccctatttgtgaaaccggcgacttcttgggtaaagatcgcgcactcgttttgcaagaa
ggtgatctactcgcggttcgttcagcaggtgcctatggttttgtaatgtcttcgaactac
aatactcgtacccgagcggcagaagtaatggtggatggtaaacaaagccacttagttcgc
cagcgtgaggagctgaccagtttgtggcagctggaacagattctaccggagtaa

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