Vibrio diabolicus: AL552_24095
Help
Entry
AL552_24095 CDS
T05332
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL552_24095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vdb03019
]
AL552_24095
03400 DNA repair and recombination proteins [BR:
vdb03400
]
AL552_24095
Enzymes [BR:
vdb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AL552_24095
Messenger RNA biogenesis [BR:
vdb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AL552_24095
DNA repair and recombination proteins [BR:
vdb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AL552_24095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
AVF96522
UniProt:
A0AAN2P916
LinkDB
All DBs
Position
1:complement(3032101..3033936)
Genome browser
AA seq
611 aa
AA seq
DB search
MTSTLLAEQSDTPVTPQRVLEEVFGYQTFRDGQQEVIEAAIEGKDSLVIMPTGGGKSLCY
QIPALVRSGITLVISPLISLMKDQVDQLKANGVAAECVNSTMNREELLSVYNRMHSGQLK
LVYVSPERVLMRDFIERLENLPLSMIAVDEAHCISQWGHDFRPEYAALGQLKQHFSHVPF
MALTATADDATRRDILERLRLHEPQVYLGSFDRPNIRYTLVEKHKPVSQIIRYLATQKGS
CGIIYCGSRKKVEMVTEKLCNNHIRAAGYHAGMDTEERAYVQEAFQRDDIQIVVATVAFG
MGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDD
GPQKQVESHKLNAMSAFAEAQTCRRQVLLNYFGEYREKPCGNCDICLDPPKHFDATEEAR
KALSCVYRVNQSFGMTYVVEVLRGMQNIRVREHGHDKISTYGIGRDHSHDYWVSIFRQLI
HKGLLFQNITRNSTLQLTEEARPLLRGDVSLELAVPRLDTAARAAKSDKLTSKNYDKKLF
AKLRKLRKSIADEDGLPPYVVFSDATLIDMAEMLPTSYGEMLAVSGVGQRKLEKYADPFL
DLIQEHITHHG
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaaccttgctagccgaacaatcagatacgcctgtaacgcctcaacgtgtgttg
gaggaagtcttcggttaccagacgtttcgtgatggtcagcaagaagttattgaagccgct
atcgaaggcaaagacagcttggtcatcatgccgactggtggcggtaaatctctctgttac
caaattccggcgttagtgcgctcagggattaccttggtgatttcaccgctgatttcattg
atgaaagaccaagttgatcaactgaaagccaatggtgtagcagcggagtgtgtgaactcg
accatgaatcgagaagagctactgagtgtgtataatcgcatgcactctggtcagcttaag
ctagtgtatgtctcgccagagcgcgtgttaatgcgtgactttattgagcgtttagaaaac
ttacccttatctatgatcgccgtggatgaagcacattgtatctctcagtggggacatgat
tttcgcccagaatacgcggcgttaggtcagttaaagcaacacttttcgcatgtgcccttt
atggcactcactgccactgccgatgatgcgacgcgtcgtgatattctagaacgcttacgc
ttacatgagcctcaggtgtatctaggaagctttgatcgtcccaacattcgttacaccttg
gtagaaaagcacaaaccggtttctcaaatcattcgctatctagccacccaaaagggaagc
tgcggcattatttattgcggcagtcgtaagaaagttgaaatggtgaccgagaagctatgc
aacaaccatatccgcgctgctggttatcatgcagggatggatactgaagagcgagcttac
gttcaggaagcttttcaacgtgatgacattcaaatcgtcgttgcgacggttgcattcggc
atgggtatcaataagccaaacgtgcgctttgttgtgcattttgatattccacgcaacatc
gagtcctattatcaggaaaccggtcgagcagggcgagatggcctgcctgccgaagcgatg
atgttatacgacccagcggacatcagttggttgcgtcgtatgttggatgaaaaagatgat
ggaccgcagaagcaggtagaaagccacaaacttaatgcgatgagtgcctttgcggaagcg
caaacgtgtcgtcgtcaggtactgctcaactattttggagagtatcgcgaaaagccgtgt
ggtaactgcgatatctgcctggacccaccaaaacactttgatgcgaccgaagaagcgcgc
aaagcgttgtcgtgtgtttaccgcgtcaaccaaagttttggtatgacgtatgtggttgag
gtgctgcgtgggatgcaaaacattcgtgtgcgcgaacacggccacgataagatttcgact
tacggcattggtcgtgatcacagccatgattactgggtgagtatcttccgccagttaatt
cataaagggctgctatttcaaaacatcactcgtaactcgacgttgcaattaaccgaagaa
gcacgcccattactacgtggtgatgtgtctttagaacttgcagttccacgtttagatacc
gctgcacgtgccgcgaagtcggataaactgaccagcaaaaactacgataagaagttgttt
gccaaactacgtaagctacgtaagtcgatcgccgatgaagatggtttaccaccatacgtg
gtattcagtgatgcgaccttgattgatatggcagaaatgctgccaacgtcatacggcgaa
atgttagcggttagtggcgttggtcaacgtaaactagaaaaatacgccgatccattcttg
gatttgatccaagaacacattactcaccacggataa
DBGET
integrated database retrieval system
