Vibrio diabolicus: AL552_24270
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Entry
AL552_24270 CDS
T05332
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb00071
Fatty acid degradation
vdb00280
Valine, leucine and isoleucine degradation
vdb00310
Lysine degradation
vdb00362
Benzoate degradation
vdb00380
Tryptophan metabolism
vdb00410
beta-Alanine metabolism
vdb00640
Propanoate metabolism
vdb00650
Butanoate metabolism
vdb00907
Pinene, camphor and geraniol degradation
vdb00930
Caprolactam degradation
vdb01100
Metabolic pathways
vdb01110
Biosynthesis of secondary metabolites
vdb01120
Microbial metabolism in diverse environments
vdb01200
Carbon metabolism
vdb01212
Fatty acid metabolism
Module
vdb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AL552_24270 (fadB)
00650 Butanoate metabolism
AL552_24270 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AL552_24270 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AL552_24270 (fadB)
00310 Lysine degradation
AL552_24270 (fadB)
00380 Tryptophan metabolism
AL552_24270 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AL552_24270 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AL552_24270 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AL552_24270 (fadB)
00930 Caprolactam degradation
AL552_24270 (fadB)
Enzymes [BR:
vdb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AL552_24270 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AL552_24270 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AL552_24270 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AL552_24270 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Carboxyl_trans
NAD_binding_2
DUF5546
DAO
Motif
Other DBs
NCBI-ProteinID:
AVF96542
LinkDB
All DBs
Position
1:3066726..3068897
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAETLQVKEIQDGIAELSFCSPKSVNKLDLATLESLDKALDALIAHQGLKGLLLTSD
KDAFIVGADITEFLGLFAKTDAELDQWLQFANSIFNKLEDLPVPTISVIKGHALGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALK
IGLLDAVVETDALYESALQTLNSAINEKLDWQARRTQKTSPLTLSKLESMMSFTMAKGLV
AQKAGPHYPAPMTAVITIEEGARFARNEALDIERKHFVKLAKSEEAKSLVGLFLNDQYIK
GIAKKAAKSASKDTQRAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQASLDLGMTEASKL
LNKRLSRGRIDGFKMAGILASITPSLHYAGIENSDVIVEAVVENPKVKAAVLSEVESHVG
DDTVITSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKVMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMADGFPERMGKQGRDAIDALFEADKYGQKNGNGFYSYTIDKKGK
PKKTFSEAILPVLADVCADKQDFDDETIIQRMMIPMINEVVLCLQEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIAEYVEMAKQHAELGAMYQVPQMLIDMAAKGESFYGAQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgaaaccctacaggtaaaggaaatacaagatggtattgcagagcta
agcttctgctctccaaaatccgtcaacaaactcgacctagcgacattggaatcgctagat
aaagctcttgatgcgctcattgcccatcaaggcctcaaggggttgttgctcacttcagat
aaagacgcattcattgtaggcgcagacattaccgagtttttaggtctgtttgctaaaacg
gatgccgagctcgaccaatggctgcaatttgctaatagcatctttaacaaattagaagac
ttacccgttccgaccatctcagtgatcaaaggccacgctcttggtggcggttgtgaatgt
gtactagcaacagacatgcgtattggtgacaaaaccaccagcatcggcctaccagaaacg
aaactgggaatcatgccaggctttggtggttgtgtacgcttacctcgcgttattggcgca
gacagcgcaatggaaatcatcacccaaggcaaagcatgccgagctgatgaagcattgaaa
attggcttactcgatgctgttgtagagactgatgctttatacgaatcggcactacaaacg
ctgaactctgcaattaacgagaaacttgactggcaagcacgccgaacacagaaaacatct
ccgctaacgctgagtaagcttgaatcaatgatgagcttcaccatggctaaaggtctagtg
gcacagaaagccggtcctcactaccctgccccaatgacagccgttatcacgattgaagaa
ggtgctcgctttgcacgtaatgaagcgttagacattgaacgtaagcacttcgtgaaattg
gctaaatcggaagaagcaaaatcactggttggcctattccttaacgatcaatacatcaaa
ggcattgcgaaaaaagcagcgaagtcagcaagtaaagacacgcaacgtgcagccgtatta
ggtgcaggtatcatgggtggcggcattgcttaccaatcagcgctaaaaggtgtgcctgtc
ttaatgaaagacatcgcacaagcgtcgctcgacctaggcatgactgaagcatctaagctg
ctgaataaacgcttatctcgcggtcgcattgatggctttaagatggcgggtattttagcg
tcaatcacaccgagcctacattacgcaggtattgaaaactctgatgtgattgttgaagct
gtcgttgaaaatccgaaagtaaaagcagcagttttgagtgaagttgaatcccatgtcggt
gacgacaccgttatcacctcaaacacctcgacgattcctatcaacctattggcaaaatca
ctaaaacgcccagaaaacttctgtggtatgcacttcttcaacccagtgcatcgtatgcct
cttgtagagatcatccgtggtgagcacacctctgatgaaaccatcaatcgtgttgtggcg
tatgctgcgaaaatgggcaaatcaccaattgtcgttaatgactgcccagggttcttcgtt
aaccgcgtattgttcccatactttggcggcttcagcatgctacttcgtgatggtgctgac
tttacgaaaatcgacaaagtcatggagcgtaagtttggctggccgatgggaccggcgtac
ttgcttgacgtagtcggcattgataccgcgcaccacgcacaagctgtgatggctgacggt
ttccctgagcgtatgggtaaacaaggtcgtgatgcgattgatgcactgttcgaagcagac
aaatatggtcagaaaaatggtaatggcttctacagctacaccatagataaaaaaggtaag
ccgaagaaaaccttctctgaagcgatcttaccagtacttgctgacgtttgtgccgataag
caggactttgacgatgagaccatcattcaacgtatgatgattccaatgatcaacgaagtg
gtgctgtgccttcaagaaggcatcatcgctactccgcaggaagcagacatggcattggtt
tatggtcttggtttccctccattccgcggtggcgtattccgctatctagacagcgtgggt
attgctgaatacgttgaaatggcaaaacaacatgccgagctaggtgcgatgtaccaagta
ccgcaaatgctgattgatatggcggcgaaaggtgaaagcttttacggtgcacaacagcaa
ggttctatctaa
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