Varroa destructor (honeybee mite): 111243180
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Entry
111243180 CDS
T07383
Name
(RefSeq) collagen alpha-5(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde04382
Cornified envelope formation
vde04512
ECM-receptor interaction
vde04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111243180
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111243180
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111243180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vde04147
]
111243180
00536 Glycosaminoglycan binding proteins [BR:
vde00536
]
111243180
Exosome [BR:
vde04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111243180
Glycosaminoglycan binding proteins [BR:
vde00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111243180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111243180
NCBI-ProteinID:
XP_022644105
UniProt:
A0A7M7IXW1
LinkDB
All DBs
Position
Unknown
AA seq
1814 aa
AA seq
DB search
MRERPRARWKALAQSNAASLRGQRQSATLSARISDNLFESNLLITGFILAATFTLTNQQH
QYSDFYKKDHEPNSIIAQSQVRDALCSDCSPESRRCIGERGLTGIRGQKGLPGPMGPPGP
PGDEGLQGEKGEQGLPGLAGMKGGRGDPGRRGVSGLHGEPGQPGMPGEPGRPGLRGKDGY
NGTRGDVGMIGFPGPKGADGRPGIMGPPGQKGEPAYGGVGAKGEKGSPGIPGPQGPPGIT
GQDGFPGRKGDPGPSGNDGRPGQPGLPGPPGMSLPGQKGERGFKGEPGLPGESAHCFNRS
IMVDNEGSEQIIFTPGPKGDKGDRGEPGEGSSPGAPGAPGIPGQPGLPGEKGDRGLPGDL
GPAGVPGYPGSPGLQGLKGDPGIPGRPGRPGEPGHKGEVGPPGLPGEMGLTGPPGAPATA
EGNTIGPPGFKGEKGMPGPMGPPGEEGRPGDLGLDGSPGPPGAPGEPGQRGNDGHPGPRG
EKGDSGLQGYPGQPGSPGLPGPEGLPGEKGLPGRDGYSIPGDRGLPGSPGKDGEPGVPGR
PGSKGLPGIPGDSLYGQPGFPGEPGPEGPKGVAGRPGQPGVPGIPGVKGDKGGVCNACEP
GIPGLKGAPGYPGEPGPKGDAGLPGSPGRAGDRGFDGYPGDRGAPGEMGMPGLMGMPGQK
GERGLDYIYDGPNEKGPPGPPGPPGYPGTPGDPGPEGPPGPQGASGPPGYDGLQGQPGLP
GDPGPTGPRGDKGDPGLPGYPGYGERGPPGLLGEPGPPGIEGPKGDKGEKGDPAPEAIKF
KERGLPGPPGDRGPVGMEGPPGPRGLPGLNGIDGQPGQDGPPGEPGFPGAPGPRGPPGLP
GSPGPMGVEGLPGMQGPIGIKGERGRPGLPGELGPPGDRGTGLPGLKGLPGPPGPPGEAG
LPGPVGREGYPGPSGLPGEPGPKGEQGLPGRDGLPGLKGDQAQEGQPGPKGDRGLPGIPG
PPGNPGNDGLPGHPGASGLKGDQGPQGPPGNPGTTGKPGSDGADGLRGEPGLPGPRGPKG
DPGNPGNPGLPGVQGPPGVEGQPGKPGLPGMPGKDGPPGFAGFVGHPGQKGDRGLPGRDG
LKGESGRAAQKGERGRPGIPGTPGAEGPSGSPGPQGPPGEKGEKGLPGEGRPGEPGPEGL
PGMPGLPGIDGPPGPPGPDGPPGLPGMPGNKGDAGAAGDPGPPGAPGAPGATGLPGPPGY
RGIKGNPGLDGPPGMPGQEGIVGAPGEPGYPGYIGEPGNPGEPGRPGPPGNPGFPGPPGP
QGPKGNIGPVGTPGLAGLKGDPGLDGLPGNPGPPGHEGPPGLPGDPGLDGPPGPIGSPGE
PGQPGWAIQGVKGDRGEPGPVGERGLPGYPGAKGEPGRDGRDGPVGEPGLPGQGNIPGPP
GRDGTPGPVGEPGSPGHPGPPGIDGLMGEPGQPGYPGEPGPVGPIGEPGPPGWQGDPGIP
GLPGFKGDQGPPGQPGFPGRSGEKGDKGERGYPGLPGPAGFQGPMGPKGQSAIAIPGEAV
PGPMGEPGERGHPGIPGDPGIPGEPGLKGEKGEPALIGMPGPAGPPGRDGLQGPPGPRGL
TGRDGPMGREGPAGPPGAATWDLVEEQVGSLVVIHSQSMEIPVCPLRLKEIWNGYSLLYL
DGNGRAANQDLGNPGSCMQRFSTMPFVFCENTDTCNYAARNDRSYWLSTMRPFSTRPVFG
REISEHISRCAVCEVPNYTLAVHSQSREIPQCPAGYTNLWHGYSWAMHTGAGAQGGGQPL
ASPGSCLQHFSPVPFVECNGARGSCSHFSNKLGFWMAQIDPQRMFNMPTTSVNEEKHTPL
QNLVSRCSVCMKNI
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagcggccgcgcgcccgctggaaggccctggcgcaatcaaacgccgcttctctg
cgaggccagcgacaatcggctacattaagtgctcgaatcagtgataacttgtttgaatcg
aacctcctaattacaggattcattttggcggcaacatttacgctgaccaaccaacaacac
caatattcagatttttacaagaaggatcacgaaccgaattctataatagcccaaagccaa
gtgagagacgcattatgttcggactgctcaccagaatcgagacgatgtatcggcgaacga
ggtctgactggaatccgcggccagaagggccttcccggccctatgggaccaccggggcct
cccggtgatgaaggtctgcagggcgaaaagggagaacaaggtttaccaggactagctgga
atgaaggggggacgtggtgatcctggacgtagaggcgtttccggcttgcacggagagcca
ggacagcctggaatgcctggtgagcccggaagacctggcttacgcgggaaggacggctac
aatggaactcgtggtgacgtcggtatgataggatttccggggccaaaaggcgcggatgga
agaccgggaataatgggtccacccggccaaaaaggagaacctgcgtatggaggtgtaggt
gctaagggagaaaaaggctcaccaggtattcccggacctcaaggaccgccaggtatcact
ggtcaagacggttttccaggtagaaagggtgatcctggaccttctggaaacgatggtcgt
cccggtcagcctgggttacctgggccaccaggtatgtccttaccaggccaaaaaggcgaa
agggggtttaaaggcgaaccaggcctaccgggcgaatcagcccattgtttcaaccggtca
attatggttgacaacgaaggttctgaacaaattatcttcactcctggcccaaaaggagat
aaaggagatcgaggcgagcctggtgaaggtagttcacctggagcacccggagcacctggt
ataccgggacaacccggtctgccgggtgaaaaaggtgaccgaggtctgccaggcgatcta
gggccagcaggagtaccaggttacccgggcagtccaggtttacaaggcctcaagggcgac
cctggtatcccaggccggccaggacgaccaggtgaacctggacataaaggagaagtggga
cctccaggacttcccggagagatgggactaacaggacctcctggagcgcccgcgacggcg
gaaggaaacacgatcggtcccccaggcttcaaaggggaaaaaggcatgccaggcccaatg
ggtcctccaggtgaagagggcagacccggggatttaggattggatgggtctcccgggcca
cccggtgcaccaggggaacctggccagcgtggcaacgatggtcatcctggtccccgcggt
gaaaaaggcgattctggacttcaaggttatcccggccaacctggaagccctgggctgcct
ggtccagaagggctacctggggaaaaaggattacccggacgagacggttattccatcccc
ggagatcggggattgcctggctcgcctggtaaagacggagaacctggagtgccaggacga
cctggctccaaggggctacctggcatccccggtgattccctctatggccaaccaggtttt
ccgggagaaccgggaccagaaggtcccaagggagtagcaggcaggcccggccaaccaggt
gtgccaggtattcctggagttaaaggagataaaggaggtgtctgtaatgcttgcgagccc
ggtatacccggtctgaagggcgcgcctggatacccaggtgagcctggaccaaaaggcgac
gcgggacttccaggaagccctggtcgagcaggtgaccgtggctttgatggataccctggc
gatcgaggagcgccaggagagatggggatgccaggtttgatggggatgcctggccaaaaa
ggcgagcgaggtttagactacatctatgacggacctaatgagaaaggaccgccaggtcca
cctggccctccaggataccctggtaccccaggtgaccctggaccggaaggtcctccggga
cctcaaggtgcttccggacctccagggtacgatggtctacaaggccaacctggtttacca
ggcgacccaggtccaactggacctcgtggcgataaaggtgatccaggtctgccaggctat
cccggttatggcgaacgcggtccgccaggcctgctcggagaaccaggtcctccaggaatc
gaaggtccaaaaggagacaaaggagagaagggtgatccagcacccgaggccataaaattt
aaggaaaggggtctacctggaccccctggtgataggggtcctgtaggtatggaaggtcct
ccaggaccacgtggtctaccaggactaaatggaatagacggacaaccaggtcaagatggc
ccgccaggtgagcctggcttccctggggcaccgggtcctcgtggtcctcctggcctaccg
ggctcacccggaccgatgggggttgaaggactgcctgggatgcaaggcccaatcgggatc
aaaggtgaacgtggtcgccctggtttacccggcgagttgggaccccctggagaccgtgga
acaggcctacctggactaaaaggcctacctggacctcctggtcctcccggtgaagcagga
ttgcctggcccagtcgggcgtgaggggtatccagggccgtctggactacccggcgagccc
ggccccaaaggagaacaaggactgcctggtcgagatggacttcctgggctaaaaggagat
caagcacaggaaggccaacctggccctaaaggagatcgcggtttgccaggtattcctggt
ccacccggcaatccgggcaacgatggactaccgggtcacccaggagcttcaggtctgaag
ggtgatcaaggcccacagggtcccccaggtaacccaggaacaacaggcaagcccggttca
gatggagctgatggactccgcggtgagccagggctacctggaccacgcgggccgaaagga
gaccctggcaacccaggaaaccctgggttgcctggagtacagggcccacccggtgttgag
ggacaacctggtaaacccggcctacctggtatgcctggcaaagacggcccaccaggtttt
gctggctttgtaggtcatccaggccagaaaggagacagaggtcttcctggacgtgatgga
ctgaaaggtgaatctggaagagcagcccaaaaaggggaacgcggtagacccggaattccc
ggaacacctggagcagaaggtccatccggctctccaggtccccaagggccgcctggcgag
aaaggcgaaaaaggtcttccgggagaaggtcgtcctggcgaaccaggaccagaaggactc
ccaggaatgcctggtcttccaggtattgatggtccaccaggacccccagggcctgacgga
ccccccggattacctggaatgcctgggaataaaggagatgctggagccgcaggtgatcct
ggaccgcctggtgctcctggagcgcctggagctaccggattgcccggtccgcctggatat
cgaggaataaagggtaacccaggactcgacggtccaccgggaatgcctgggcaagaagga
attgtaggagctcctggggaaccaggatacccaggttacattggagagccgggcaaccca
ggagaaccgggccggcctggaccacctggtaatccaggtttcccaggtcctcccggacct
caaggtcctaaaggcaacatcggtcctgtgggaactccaggtttagctggactaaaagga
gaccctggtttagatggccttcctggcaatcccggtccccccggccatgaggggccacct
ggactacctggtgacccaggcctagacggcccaccgggtccaattggctctcctggagag
cccggacagcctggctgggcaatacagggcgtaaaaggagacagaggagaaccaggccct
gtaggggaacgaggattaccagggtaccctggtgctaagggcgaacctggtcgggacgga
cgagatggtcctgtaggagagcccggactacctggtcaaggtaacattccggggcctcct
ggaagagatggtacgcctggacctgtaggagaacctggttctcctggccatccgggtcct
cccggtattgacggcttaatgggcgagcctggccagcctggctaccccggcgagccagga
ccggttggacccatcggtgaacctggtcccccaggatggcaaggagacccaggcattcct
ggtcttcctggctttaagggcgatcaaggaccgcctggacagcccggttttccaggtaga
agcggtgaaaaaggagacaagggtgaacgaggttatccagggcttccaggaccggctgga
ttccaaggaccaatggggccaaagggtcagtcagcaatcgcaatccctggtgaggctgtt
cctggtccaatgggagaacccggagaacgcggccaccctggaattccaggggatcccgga
atcccaggagaacccggcttgaaaggggaaaagggtgaaccagctcttattggaatgcct
ggtcctgcaggcccaccaggaagggatggcctacaaggaccacctggacctcgtggtctt
accggacgcgacggccctatgggtagggagggccctgcaggcccaccaggggcggctacg
tgggatttggttgaggagcaagttggatcgttggttgttatccactcccagagcatggag
ataccagtgtgcccactccgccttaaagaaatttggaacggatattcattgctttatttg
gacggaaatgggcgggcagctaatcaagaccttggcaatccaggatcatgtatgcagcgt
tttagtacaatgcctttcgtgttctgtgaaaacacagatacttgtaactatgctgcacgt
aacgatcgctcgtattggttgagcacaatgcgtccattctctacgcgacccgtttttggc
cgagaaatttccgagcacatctcgcgatgcgctgtttgtgaagtacccaattatacgctc
gcggtgcacagccaatcacgtgagatccctcaatgcccggcaggctacactaatctatgg
catggttattcgtgggcaatgcacacaggtgctggagcgcagggcggtgggcaaccactt
gcctcgcccggttcctgcctacagcatttcagtcccgtgccgttcgtcgagtgcaatggt
gcccggggatcatgctcgcatttcagcaataagctaggcttctggatggcacaaatcgat
cctcaacgaatgtttaacatgcccaccacaagcgtaaacgaagagaagcacacacctctt
cagaatctcgtatctaggtgttctgtgtgcatgaagaatatttaa
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integrated database retrieval system
