Varroa destructor (honeybee mite): 111243181
Help
Entry
111243181 CDS
T07383
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde04382
Cornified envelope formation
vde04512
ECM-receptor interaction
vde04518
Integrin signaling
vde04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111243181
04518 Integrin signaling
111243181
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111243181
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111243181
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vde04147
]
111243181
00536 Glycosaminoglycan binding proteins [BR:
vde00536
]
111243181
Exosome [BR:
vde04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111243181
Glycosaminoglycan binding proteins [BR:
vde00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111243181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111243181
NCBI-ProteinID:
XP_022644107
UniProt:
A0A7M7M8M5
LinkDB
All DBs
Position
Unknown
AA seq
1778 aa
AA seq
DB search
MNRNWINPALCFLLMSLYVKRTDSFVCKGCNYPPCVCIGQPGEPGYPGLPGMKGTRGPVG
PKGFQGEPGQRGEPGEPGYHAPDGPKGDRGFDGEPGIDGYTGRPGFPGVPGLPGLRGKDG
CNGTKGEPGFPGTPGMPGEPGLPGLDGLPGLKGQPGDGGINSVGVRGDDGDDGFPGIQGA
DGYPGRPGLPGPRGDPGYSGKSGLPGYPGDSGAPALIQLIGDRGEPGFPGEPGPKGILFY
RSPLINGTDRNEGMKGARGSHGDPGYPAALGPVGPPGPNGADGLPGYRGPRGSPGEVGPM
GPIGPEGHPGKSGSKGQQGDPGWDGTDGQPGAKGSRGYPGYPGVPGQIGLQGLPGNIVRG
LVPIQGLPGIRGERGDPGPIGYSGFKGRVGPRGFPGTPGRPGPPGSLGSDGRPGRSLKGE
QGDPGISGPPGEVGRPGPPGYPGLPGEPGRPGKDAYGPPGEPGIDGAPGIPGKPGLPGED
GAPGEKGRPGIGAPATGLQGAPGLPGPPGLPGDDGSPGRRGVDGMPGYPGDDCPFCPSGL
SGIEGDPGDPGFPGYIGVPGEPGPPGTPGLRGGDGLPGIPGDKGAPGIPGLPGQDGQKGE
RGDSGKLILQGDFREQIGEPGLPGPQGRKGEMGFPGAPGKPGRIGAEGRPGNPGVQGYQG
TPGLTGYKGIKGALGDRGFPGMGFAGLPGAIGPRGNRGPPGIQGMPGQKGEPAKRDIDIA
QNITRSHGDKGLLGPTGETGAMGVPGLPGETGKDGRPGPPGMRGPPGPPGSSPIGEPGDP
GAPGYPGYPGYPGPIGEKGLQGEPGDIGYPGPPGPKGQPGFIDGTGTPGDPGEPGHQGWP
GEPGHSGPDGPPGPAGFRGMPGYQGKPGDIGFDGRPGLPGIPGDAGFGTKGEMGEVGYDG
TRGAPGLPGMPGATGWPGLKGLPGDIGYPGLVGLAGERGLPGLDGLPGLPGYPGYIGDVG
EPGDDGLEGLEGAPGWPGPQGYEGSPGLPGEPGEPGRVGVTGPEGIKGDKGLIGDPGFDG
LPGPPGDDGRLGDMGDDGEIGIPGFDGNSGSDGLPGPYGEKGEPGDMGDRFGAPPGAPGP
PGAPGNSGVPGLQGKQGMPGYSGPPGHPGFQGPLGEKGIRGYAGYVGTIGFPGEDGLIGE
VGLPGEDGDPGRPGVPGLSGPLGTPGPRGFPGPPGPKGSTGYDGIPGSPGSGGLPGLPGN
PGLPGLHGVKGLPGLEGMKGEPGEDGLLGRHGSPGIPGQPGRKGMAGPPGFRGRAGPPGL
PGPDGVIQGSTEKGQKGDSGYPGEPGYEGSIGPKGDPGNSGKDGLRGLPGPPGFGLGPRG
LDGLPGHKGQKGYPGLPGLQGEPGRHGMRGLKGRDGVPGPPGYSLRGEPGPLGERGADGP
QGFPGQLGDPGYPGAPGSDGQVGQKGDTGDPGTQGMTGLDGPMGEPGPPGDLFFEVSPPG
PPGPRGLDGYPGYPGMRGLPGIPGFKGDPGEYGDAASPGPPGYPGLEGAVGDVGPPGYPG
SPGMPGPPGPPGLDGGGGTLHRRKYTIFTVHSQSTSVPDCPVNASKLWDGYSFLYILADR
RAHGQDLGEPGSCLPNFSPMPYLFCEQPQNEDENCRFAARNDYSYWLNTDLQHEGREAIR
GNRIKEFISRCAVCQTDKPVIAVHSQSIEIPACPRDWETMWIGYSFAMTTDAAAQGSSQS
LASPGSCLPDFRPTPFIECRGIGTCDYFPSAFSFWLTTIENDKQFETPERVRSRPGDVER
LVSRCSVCKRRSVTFRANGNRLPPAPSIQQQPPSFLFE
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaactggataaatccagctctttgtttcctactgatgtccctgtatgtcaaa
agaactgattcctttgtgtgcaaaggatgcaattatcctccatgcgtatgcatcggccag
ccgggagaaccgggctaccctggtcttccgggaatgaaaggtacccgaggtcctgtaggt
ccgaaaggctttcaaggcgaaccaggacaacggggtgagcccggggagccaggctatcac
gctcctgacggaccgaaaggtgatcgaggctttgacggcgaaccgggaatagatggatat
actggacgaccgggctttcctggggtgcctggcctgcctggattgcgcggtaaagatgga
tgtaacggtactaagggcgaaccgggttttccgggcacgccggggatgcctggggaacca
ggtttgcctggcttagacggcctgccagggcttaaaggtcagccaggtgacggaggtatc
aattcggtcggagttcgtggagacgatggtgacgacggttttccaggtattcaaggtgct
gatggatatcctggtcgtccgggtttaccaggtcctcgaggcgatccaggttacagtggt
aagtcgggtcttccaggctatcccggtgactctggagcacctgccttgattcagctcatc
ggcgatcggggagagcctggttttccaggcgagccgggtcctaagggcattctgttttat
cgaagcccacttattaacgggaccgatagaaacgagggaatgaagggagcacgaggaagt
cacggagaccctggatatccggctgcattaggacctgttggaccaccaggcccaaacgga
gccgacggactccccggctatcgtggaccacgcgggtctcctggagaagtcggacctatg
ggtcctatcggtccggagggccatcccggaaaatcaggaagtaaaggccagcaaggagat
cctggttgggacggaactgatggccagccgggagcaaagggcagtcgaggatatccgggt
taccctggtgttcccggacaaatagggctgcagggtttacctggcaacattgtacgtggt
ttggttcccatccaaggccttcccggaatacgtggtgaacgcggtgatcctgggccgata
ggatacagcggttttaagggacgagttggccctaggggttttccaggtactcccggaagg
cctgggccacccggatcgctaggctccgacggtcgcccggggcgttcgttgaaaggagaa
cagggcgaccccggtataagtggtccacctggtgaggtgggtagaccaggtccaccagga
taccctggcttaccaggagagcccggaagacccggtaaagacgcttacggacctccaggt
gaaccgggtattgatggagcgcctggtattcccggtaaacccggcttaccaggtgaagac
ggtgcgcctggtgaaaaaggacgaccaggcataggggctccggctactggactacaggga
gcacctggactcccgggtccaccaggacttcccggagacgacgggagtcctggacgacgc
ggtgttgatggaatgcctggttatcctggcgatgactgcccattctgcccgagcggactt
tcgggtatcgaaggtgatcctggggatcccggtttccctggatatattggcgtgcctggc
gaacctgggcctcctggcacaccgggacttcgtggtggcgacggcctgcctggtatacct
ggggacaaaggggccccgggaatcccgggtctcccgggacaagacggccagaagggagaa
cgaggtgattcgggcaaactcattcttcaaggagattttcgggagcagataggagaacca
ggtcttcctggtccacaaggtcgcaagggcgagatgggctttccgggtgctccgggcaaa
ccgggtcgtataggggctgagggacgaccaggaaatcccggtgttcaaggatatcaagga
actcccggtcttacgggctataaaggcattaagggtgcacttggagacagaggatttcct
gggatgggctttgctggattgccaggtgccattgggccccggggaaatcgcggaccccca
ggaattcaaggtatgccgggccaaaagggtgaaccagctaaaagagacattgatatagca
caaaatatcacgcgctcacatggtgacaaaggtttgctcggaccaactggagaaacagga
gccatgggtgtgccaggcctcccaggtgaaacaggtaaggatgggagacctggtcctccc
ggtatgagaggtccgcccgggccacctggttcatcgcctataggagaacctggtgatcca
ggcgcgcctggatatccaggctatcctgggtatcctggtccaattggagagaaaggttta
caaggcgagcccggtgatataggttatcccggtccaccgggaccgaagggacagccaggt
ttcatagacggaacaggtaccccgggggaccctggtgagccgggtcatcaaggttggcca
ggtgaacccggccactcgggacctgatggtccgccgggtcctgcaggcttccgcggaatg
ccaggttatcaaggaaagcccggcgatataggtttcgatggtcggcccggattaccgggt
attcctggcgatgctggtttcggtactaaaggtgaaatgggagaggtgggttacgacggg
acacgtggagcacccggccttccaggaatgccaggtgcaactggatggcctggtcttaag
ggtttgcctggtgatatcggctacccgggcctcgttggccttgcaggagaacgtggtcta
ccaggattagacggactgcccgggcttcccggttaccctggatacatcggagacgtgggg
gaacctggcgatgatgggctggaaggattggagggtgcgcccggttggccaggaccgcag
ggctatgagggttctccaggtctgccaggcgaaccaggtgaacccggtcgcgtcggagtg
actgggcctgagggaattaaaggcgataagggcttaatcggcgatcccggttttgacggg
cttccgggcccacctggcgatgacggtcggcttggagacatgggtgacgatggcgagatt
gggataccaggatttgatggaaattccggctctgatgggctaccaggtccatacggtgaa
aaaggcgagcctggagacatgggtgaccgttttggggctccacccggtgctcctggaccc
cctggtgctcctgggaatagcggagtacccggtcttcagggcaagcaaggcatgcctggt
tacagtgggccacctggacaccccggttttcaaggtcccctgggagaaaaaggcattaga
ggttatgctggatatgtgggtacaataggattccctggtgaagatggcctcattggtgaa
gttggactccctggcgaagatggcgatcctggacgtccaggagtcccaggtttaagtggt
cccttaggtactccaggcccgcgtggatttccgggtccgcctggccctaagggctctact
ggttatgatggcattcccggaagccctggttctggaggccttcctggtctccctgggaat
ccaggactgccaggtctccatggtgttaagggtctgccgggtttggaaggcatgaaggga
gagccaggcgaagatggtcttttgggtaggcacggaagccccggaattcctggtcagccc
ggccgtaaaggcatggccggaccacctggctttagaggaagagctggtcctccaggcctg
cccggtcccgacggagttattcaaggatccacggagaaaggtcagaaaggtgattctggg
taccccggtgagcccgggtacgagggtagtattggaccgaaaggagatccaggaaattct
ggtaaggatggactgagaggcctacctggtccgcctggctttggactcggtccccgaggt
ctagacggacttcctgggcataaaggtcagaaaggctatcctggtctaccaggtttacaa
ggtgagccaggacgtcatggaatgcgtggcttgaaaggtcgcgatggggtaccgggtcca
cccggttacagcttgcgtggagagccaggacccctaggagagcgtggagccgacgggcct
caaggttttccaggtcaattaggggacccaggttacccaggggctccaggttccgatggt
caggttggtcagaagggagacacaggcgatccaggtacccaaggaatgacaggacttgac
ggacccatgggcgaaccagggccccctggggacttattttttgaagtgagtccgccgggt
ccaccgggtcctcgcgggcttgatggatatcctggttacccaggaatgcgaggattgcct
ggaatacctggattcaaaggagatcccggggagtacggcgatgctgcaagccctggtcct
ccaggctatccaggattagaaggggctgtaggagacgttggacctccaggttaccccggc
agtccaggtatgcccgggccgcccggtccccccgggttagacggcggcggaggtacatta
catcggcgaaagtatactattttcacagtgcacagtcaaagcacgagcgtgcctgattgc
cccgttaatgcttcaaagctttgggatggctattcgtttctgtacatattagctgatcgt
cgcgcacacggccaagaccttggtgaaccgggatcatgtctacctaattttagcccaatg
ccgtacctattttgtgaacaaccgcaaaatgaagatgaaaattgccgattcgcagcccgt
aacgattattcgtattggctaaacacagatctacaacatgagggtcgtgaagccattcgg
ggtaatcgcataaaggaattcatttcgcggtgcgctgtgtgtcaaacggataaaccagtg
attgcagtacacagtcagagcatagaaatcccggcttgcccccgtgattgggagacaatg
tggatcggatatagttttgctatgacaacggacgctgcagctcagggtagttcacaatct
ctagcaagtcccggttcgtgtctgcctgacttccgtccgacgccgttcatcgaatgcagg
ggcatcggcacctgtgattacttcccctctgcgtttagcttctggttgactacaatcgag
aacgataaacagtttgagacacctgaacgggtccgcagtagaccaggggatgtggaacga
ctagtatcacgctgctcggtctgtaagcgacgcagtgttacgttccgcgcgaatggcaac
aggcttccaccggcgccatcaatccaacaacaacctccgtcctttttattcgagtga
DBGET
integrated database retrieval system