Varroa destructor (honeybee mite): 111243406
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Entry
111243406 CDS
T07383
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
vde
Varroa destructor (honeybee mite)
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vde04121
]
111243406
Ubiquitin system [BR:
vde04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
111243406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
EIIBC-GUT_N
HAM1_N
VPS13_N
Motif
Other DBs
NCBI-GeneID:
111243406
NCBI-ProteinID:
XP_022644645
UniProt:
A0A7M7J175
LinkDB
All DBs
Position
Unknown
AA seq
1965 aa
AA seq
DB search
MEWGEEGDSLSFEDSERFDEDSLCSWMSERESICNHWRGWKKPSPPSQTTASAKYNYSGN
GKNESSLSGVVTSLVELSAREVAAHIPFEVVEHVYPPVPEQLQLRIAFWSFPESEEDIRL
YSCLATGSADEFTKGEHLFKTKATRDLLQIGFHLSATVKPSGLGSGGGQSGSKSQQTPAA
NPATKSSQFNVAVTFDRRRITSCNCTCVSTASWCSHVVAVCLHRIHQPTTVCLRAPVSES
LSRLHRDQLQKFAQYLISELPQQILPTAQRLLDELLSSHETDINTLRGAPDPTAGASVYE
QTSWCLDEGTLHESIRKILVKLSMPSPIVFSDVNFLSSTSPPAASEWQSLLRPLRGREPE
GIWNLLSIVREMFRRADRNAVPLLELLTEEMLACEPILMWWFNTKVSMHTGSTGSQGHRS
SNNNGVSHSTSQSSQHTCASLCDEIVVLWRLAALNPALSPLEKTTFFDQMCQWHCRVLES
VFRSKNSQGGNAGNNNNNNNNGGTNNMTLNKRWADIDVFPGFKPALESCLLDWLDYPIPS
ITYNEGGACRFYSPYMHLRLADHSQSGSKGRPVEIGRKSPYNVPTVSGPFDTCLSSTRSS
LSSEGFNENLGNNNNNNINVNNNNNNNNEPSGSQHVQPTQAGAGNNNNNNNNNVSVEVAE
ARDESGNSGNPDVPGFSRPTGTNVAGGGAGAVGVAALVEPAVPNPAAANPPDDEYQMYYY
DAAQARAAAQQNYGMPVAQKPNPIPEPSELSKQIKKMEDRLEILFARAEALHAHGHTQEA
CKLAFRLAQELLASPPSFDMDQPTASLSSTTSGGKANNGGKRGRGKFNPACHQASLLASA
TLSKAAFLCQVLGENHTDHHYLAFRIGIFGLELVRPPASTKPLEVRLVNQEQDLVTLLKK
IPLGHPEMHELRERATALRERRLVSRGEALLPLMLASYIFDALVLSKEQPGSSGKNSSSY
SGVVCRHRLGGDEELGFDAAVAALGLKANVSEAEHPLLCEGTRRQRGELAITLLMHYKDD
QHKLALIMDKLLDKEVHQMYKNPPSTLTASLYGAGGGSSSGSGTKETTAATPQASATSEE
HASASWRRGPEDEGANSPPSGWEEDYKAWEAKFRCTNFKAMFRRHHSSNGMASIDSSAPE
TTSSDNSPTLIRRRVAARAAAMESSDSGSSGESSDSFASSSSGDRNKGNPMFHASGASTG
GAGPQPTPGPSGLAGAGALTTAPNSNLVVNATQQQQQQRDMNLASAAAAAAAAAAASGVG
SPAVGPNIFAVDEFNPTMVAGPSTIFTMDEFNPSNIQMVQTQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQLNRNQPLVTQMKNITVNSGQASQNGARGGFKG
GSKRSFHPSIPNQPSEASAHFMFELAKTVFTKAGGNNSMAVNFTQPSSSQNHRGPHRALH
MCSFQIGLYALGLTNAVSPNWLSRTYSSQVSWITGQAMEIGCSAILFLIETWEGHLTPTE
VVTLADKASRGRDPSMQRACAELALSCLPHAHALNQNEIQRALLQCKEQSADMLKRACLT
VEQAAQGGGVIPEVLFDVARRWYDLYEEGLGDRPASPPPPQRQQHQHQQQQQQQPHQHPA
LPPAPHPAASHNQHGAMEQAPHMFVDQPAMQMPPSLPTYPHTTYMPPPQHGSPYSPYSMP
PPFVVPGAIHPAYLPQYHPTYPPPPQSFYPGTPTGPQYHPQPQQATHPSRPHVLPPHPPH
APPHHGPPPLLAPLVATPPPNSQAPPPQQPPQNQTSPDALKYLVSAYRVGLIAMDLLAKK
IHDERMQAKYARTPSYGEDVKWLLGVAKKLGTSCLQEFCVCVVNSVASPFVLYDIITEIA
QFLAKNQPGGPSHQVIRSPLLTPLIQKCQQMFIACIHAKLYHISPAEYDDFLSIIRSARQ
AFQLSPAGLVQFSDHLQTLRRSKSCKKDLWTRIVSAQQQMNQQSL
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atggagtggggtgaagaaggcgacagtctgtcgtttgaggacagcgaacgatttgatgaa
gactcgctttgttcatggatgtcggaacgcgagtcgatttgcaaccactggcgtggctgg
aagaaaccgtcgccaccttcgcagaccaccgcgtcggccaagtataactatagcggaaat
ggtaaaaatgaatcttccttgagcggcgtcgtgacttcgttagtagagctctcagcccgc
gaggtagcggcccatatccccttcgaggttgttgagcatgtatatcctccagtaccggag
caactccaacttcgtattgctttctggagctttccggaaagtgaggaagatatcaggctt
tactcatgcttagcaactggctccgctgatgagtttacgaaaggcgagcacctttttaaa
accaaggccacccgtgaccttcttcagatagggttccatttgagtgccacggtgaaacct
tcgggcttgggcagtggcggtggccaaagtgggtcgaaaagtcagcagactcctgccgcc
aatccggcaacgaagagttcacagttcaacgtcgctgttacgttcgaccggcgccgtatc
accagctgtaactgcacctgcgtatcaacagcgtcgtggtgttcacacgttgtagctgtg
tgcctgcatcgtatccatcaaccgacgacagtgtgccttcgagctcccgtttccgagtcg
ctctcacgactgcaccgcgatcagctgcagaaatttgcgcagtatctcatctcagagtta
ccccagcagatattaccaacggcacagcgactccttgacgaattgctgtcgagccatgag
acagatattaacacgctccgaggggcgcctgatcccacagccggtgcgtctgtgtatgag
caaacgtcgtggtgtctcgatgaaggcaccctgcatgagagtattcgtaagatcctggtc
aagctctcgatgccgtcgccaattgtgttttccgatgtcaatttcttgtcatcgacgtct
ccgccagcagcatcggaatggcaaagtctcctgcggccactacgcggtcgtgaaccggag
ggcatctggaatttgttgtcaatcgttcgcgagatgtttcgacgggccgatcgcaacgcg
gtccctctgctcgaactcctcacggaggaaatgctcgcatgtgagccaattctcatgtgg
tggttcaacacgaaagtgtcgatgcatactggatctaccggtagtcaaggccatcgttct
tcgaacaacaacggggtttcgcattcgacatcgcagagctcacagcatacatgcgcgtcg
ttgtgcgatgaaatcgttgtgctctggcgtctggcagcgttaaatcctgccttgtcaccg
ttggaaaaaacgactttcttcgatcagatgtgccaatggcactgtcgtgtcctcgagtca
gtcttcagatcgaagaattctcaaggtggaaatgcaggcaacaacaataataataacaat
aacgggggcacgaataatatgacccttaacaaacggtgggcagatatcgatgtgtttccg
ggcttcaagccggctcttgagtcgtgcttgttagactggcttgactatcctattccaagc
atcacgtataacgagggtggtgcatgtcgtttctactcgccgtatatgcatctgcgatta
gcggatcactcacagtctggcagtaagggtcgacctgttgaaataggacgcaagtcgccc
tacaacgtgcccaccgtctcagggccattcgacacttgcctgagctctacgcgcagctct
cttagctccgaaggctttaacgaaaatcttggcaacaataacaacaacaatatcaacgta
aacaacaacaataataataacaacgaaccgagcggcagtcaacatgttcagcctacgcag
gcaggcgcaggaaataacaacaacaataataataacaacgtgtcagttgaggtcgccgag
gccagggatgagagcgggaactcaggcaatccagatgtgccaggcttttcccgaccaact
gggacaaatgtcgctggcggtggagctggagccgtcggagtggctgcccttgttgagccg
gccgtccccaatcctgcggctgcgaatccgccagatgacgagtaccagatgtactattat
gatgctgcccaggcacgcgccgctgcacaacagaactacggaatgccggtcgcacagaaa
ccgaatccaatacctgagccgtccgagttgtctaagcaaattaaaaaaatggaggaccgt
ttagaaattctgtttgcgcgagccgaagcgcttcatgcccatggccacacgcaggaagca
tgtaagctcgccttccgtctggcccaggaactactggcatctccgccttcttttgacatg
gatcaaccgacggcgtccctgtcatcgactacttccggaggaaaggcaaacaacggtggc
aagcggggccgagggaagttcaaccccgcctgtcaccaggcatcgctcttagcgtcggca
actctgtctaaagccgcttttctgtgccaggtgttaggggagaaccacaccgatcatcat
tatttggcgttccgcataggaatcttcggtctggaactggtacggccaccagcgtcgacg
aagccgttggaagtgcgtcttgtcaaccaggagcaagatctggtcactttgctcaagaag
atcccgcttggccatcctgagatgcacgaattacgggaaagggcgaccgctttaagggag
cgtcgccttgtatcacgcggagaggctctcctgcccctcatgctggcgtcgtatattttc
gatgccctggtgctctccaaggagcagccaggttcgtctggaaaaaactcttcctcttat
agtggggttgtgtgccgtcatcgtctgggaggcgatgaggaactcggctttgacgccgct
gttgccgcactcggattaaaggccaacgtgtccgaggcggagcatccgctcctctgcgaa
ggcacacgaagacagcgcggcgagttagctattacactactgatgcattataaggatgac
cagcacaagctggccttgattatggacaagcttctggataaggaggtacaccaaatgtat
aagaaccctcctagcacccttacagcctcactttatggagcgggcggcggcagcagcagt
ggaagcggcacgaaagagacaactgcagctacgcctcaagcgtcagcgacatcggaggag
catgccagtgcgtcctggcgacgaggaccggaggacgaaggcgccaacagcccaccctcc
ggttgggaggaagactataaggcgtgggaagcgaaattccgttgcacgaacttcaaggca
atgttccgacggcatcattcgtcaaatgggatggcatccatcgattcatcagctccggag
acgacttcgtcagacaactcacctacgttgatccgacgaagggtagcagcccgtgcggct
gccatggaaagcagcgattcgggctctagtggcgagagcagcgatagcttcgcctcctcg
tcttcgggggaccgaaacaaggggaatccgatgtttcacgcaagtggcgcatctacaggt
ggtgcgggaccccagcccacgccgggaccatctggtctcgctggggccggcgccctgacc
actgccccaaattccaaccttgtcgtgaatgccacccagcagcagcagcagcagagggac
atgaatttggcgagtgctgcagcagcagcagctgccgccgctgccgcatcaggggtgggt
tcacctgcggttggcccaaacatatttgctgtcgatgaatttaacccgacaatggtggcc
gggccctcaaccatattcacaatggacgagtttaatccatccaatatacagatggtacag
acgcaacaacagcagcaacaacaacagcagcaacaacagcaacagcagcagcagcagcag
cagcagcagcaacaacaacaacaacaacaacaacaacaacaacagcagcagcagcagcag
cagcagcagcagcaacaacaacagcttaatcgtaaccagccgctggtgacacaaatgaaa
aatatcaccgtgaatagcgggcaggctagccagaatggcgcccggggcggattcaagggt
ggatcgaaaagaagtttccatccgagcattcccaatcaaccatccgaggcgtctgcgcat
tttatgtttgagctagcaaagactgtcttcacgaaagcgggtggtaataattctatggcc
gtcaacttcactcagccatcgtcgtcacaaaatcaccgaggtccacaccgtgcacttcac
atgtgctcgttccagatcgggctgtacgcacttggtcttaccaacgccgtctcacccaac
tggctatcaaggacgtattcatcgcaggtatcctggatcactgggcaggccatggagatc
ggctgttcggcaatccttttcttgatcgaaacctgggaaggtcatctcaccccaaccgaa
gtggttaccctggctgacaaagcgtcccgcggcagggacccttcaatgcagcgcgcctgt
gctgagttagcgctctcgtgtctaccacatgcgcatgccctaaaccagaatgaaattcag
agagcgcttctacaatgcaaggagcagtcggccgacatgctgaaacgggcgtgcctcaca
gtggaacaagctgctcagggtggcggcgtgattcccgaagtgctattcgatgttgcccgt
cgctggtacgatctctatgaggagggccttggcgaccggccagcttcgcctcctccgccg
caacgccagcagcatcaacatcaacagcagcagcagcagcaaccgcaccagcatccggcc
ctgccacctgcccctcacccggcggcgtcgcacaatcagcacggcgctatggagcaggcg
ccacatatgttcgtcgaccagccagccatgcagatgccaccctcacttcccacgtatcct
cacacaacgtatatgccaccgccgcaacatggcagcccatactcgccatattcgatgcca
cccccgttcgttgtaccgggtgcgattcatccggcatatctgccacagtaccaccccacc
tatccgccgccgccccaatcgttctatccgggcaccccaactggccctcaatatcatcca
cagccgcagcaagcgactcatccgtcgaggcctcacgtgttaccacctcatccgcctcat
gcaccaccccatcatgggccaccgccgttgctggcgcccctcgtggccacacctccacca
aattcccaggcccctccacctcaacagccgccacagaatcagacgtcgcctgatgcactg
aagtatcttgtgtctgcgtaccgggtcggtttaatcgctatggacttgctggctaaaaag
attcacgatgagcgaatgcaagcgaaatacgcgcgtactccgtcatacggggaagacgtt
aaatggcttttaggagttgccaaaaaattaggcacgtcctgtctgcaggaattctgtgtc
tgcgtcgtcaactctgtggcctcaccattcgtcctctacgatatcataacagagatagca
cagttcttagctaaaaatcaaccgggagggccgtcacatcaggtgattcgttcacccctg
ctcacgccgctcattcagaagtgccagcagatgtttatcgcgtgtattcacgctaaactc
tatcacatttcgccggcggagtacgatgacttcctctcaataattcgttccgctcgtcag
gcgttccagctgagccccgctggactcgtccaattcagcgatcatctgcagacgttgcgc
cgatcaaaaagctgtaaaaaagatctctggacaagaattgtttccgcccaacaacaaatg
aatcagcagagcctatga
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