Varroa destructor (honeybee mite): 111243642
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Entry
111243642 CDS
T07383
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111243642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vde03009
]
111243642
Ribosome biogenesis [BR:
vde03009
]
Eukaryotic type
Pre-60S particles
RNases
111243642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
111243642
NCBI-ProteinID:
XP_022645231
UniProt:
A0A7M7M3F9
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MFRSQGRLSGVVCPLHVVGQCNRPYCHFKHSPSVPQQQAPLGGSEPAGAESSPKTSDIVA
SGSIPTNLQQPPKRPLEPAKPARSHIPAIRVPQYRPTPIAVLQRRHQNAATNAARVLSTE
AGKVPAVGVDTYSTHQFAKADETRVIEPAFSEDEDDEEEAILMEIFQKGVMGESAEQQSN
AHPMGQLDDDRLKEPQRFEKRRHKEEETPNDFVIDLTEGDDYDASTTKKYDNEEMSKKKQ
SYKDGYRDEAKYLKRRLSSSSPKREDSLSLIGSSRSKDEGHSSSSSTSTASRKRHSSDAT
EHDYKSRSTGSSNGHDRDQSSKESPFSSVSLLTEKDRLNGAKEKQHRKSNESAAEDSNEV
DNRSSSSKDHEKSSSRSKDRRRNKSRHSSSSKDRDRDKEKDQIKDRDRDKSKDKRKSSSS
SSSSSKDTRLSSSSSKEKSSSSNSSSHSKDTEQKRSTKHKTSNGFHSDKKEDSGNKKSGS
SHREEKNHSKTSGVSISKRKSWGEHQGGYSDSGARSDDSARDHGDGGGSSSSEGRGSHRR
TSTSADDRSKRVKIEPGVIAVGDIDINDVDLSDEDPEQECLRLFQECESQMSLNKDNNGP
AKTTQDSSLPVSVSEPSKVIDMVGVTRKRIAHDPGARLVATVPPVPKKPFRPSPAQQLVM
RQEAMQRARLKQQNSSNETQATPIFHPTTPTEQRRQRICTVSTDLVAAVAQRKNLALASA
KARQVGIGADAAAGRSSTGAQVIKRIANTVPLPHATNHVQTKGVARVAHVAKALGPSDNP
VAPPRPRIQFDSNMKVPVNLRQLSLDKLIDLNNMICTTYEESYEKSLNEERDVCGRAKDR
RVYSNLVANLIMRLKKESGELGPSSTAPQAVSHADVLGGAKAKKMSFSIEKHRFRRNTSV
DNMTEEQFYEHMREKYLMKSTELDQMGFPRPCEGKPGKAEFRHEAALSAPPDPRTGNERT
CVRCKKVYFVDRDGMYLRHEECVYHWGKNWMRHVKRSNVREQQYTCCDAESGSDGCSVAK
GHVFDNPILKEDGGYMTTLTPEPAAANNFKKVYALDCEMIYTTRGTELARVSMVDMNLRT
IYETKVKPRNPVLDYNTRFSGLKMEDLESVTTELHEVQAAMLALVSADTILIGHSLESDL
KALKFIHSTVVDTSLVFPHKMGLPYKRALKNLLKDYCQKIIQDGVDGHDSAEDAKACMEL
MLYKVKQDLKSE
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgttctcagggtcgtctttcgggggtggtatgcccacttcacgttgttggacaa
tgcaaccggccctattgtcactttaaacattctccgagcgttccacaacaacaggctccg
ctgggagggagcgaacccgctggcgcagaatccagccccaaaacttcagacattgtcgca
tcgggtagtatacctactaatctgcaacagcctccaaaacgacctttagagccagctaaa
cctgcgcgtagtcacatacccgctattcgcgtaccgcagtatcgtcccacgccaatagca
gttctccaacggcgtcatcagaatgccgctacaaatgctgctcgcgtattgtcaacggaa
gcgggtaaggtgccggcggttggggtcgatacctattcgacgcatcaattcgctaaggca
gatgagaccagggtgattgagcctgcattctcagaagatgaagacgacgaagaagaggcg
atacttatggaaatctttcaaaaaggtgtcatgggtgagtctgcggagcaacagtcaaac
gcacacccaatgggtcaattagacgacgatcggcttaaggaacctcaaaggtttgagaaa
cggcgtcataaagaagaggaaacaccaaacgacttcgtgattgatttgacggagggagac
gactacgatgcttcgacaaccaagaaatatgacaacgaagagatgtcgaaaaagaagcaa
agttacaaggatggctacagagatgaggcaaaatatttaaaacggagactttcttcctct
agcccaaaaagagaggacagcttgagtctaataggttcgtcgcgatcgaaggatgagggg
cacagttcgtcctcttcaacgagcacagcgtcaaggaaacgacatagttcagacgcgaca
gaacacgattataagtctcgcagtactggcagcagcaatggacatgacagagatcaaagt
tcaaaggaaagcccattttcgtcagtatccctactgacggagaaagaccggcttaacgga
gctaaagaaaagcagcacagaaaaagcaatgagtcagcagccgaagattcgaatgaagta
gacaaccgtagcagcagtagtaaagatcatgaaaaaagctcctcacgtagcaaagatcgg
cgtcgaaataaatcgaggcattcgtccagtagcaaagatcgagacagagataaggaaaag
gatcaaattaaagacagggaccgcgacaaatcgaaagacaaacgtaaaagtagtagtagc
agtagcagcagtagtaaagacacgcgcttatcgtcgtcgtcgtcaaaggaaaaatcatct
tcttcgaattcgtcgtctcattcaaaagataccgaacagaaacgctcgacaaaacacaaa
actagtaatggatttcactcggacaaaaaggaagatagcggtaataaaaaaagtggttca
tctcatcgggaagaaaaaaatcattcgaaaacatcgggtgtctctatttcgaagcgtaag
agttggggcgaacatcaaggtggatattcagatagtggtgccagatcagatgatagcgcc
agagatcacggtgatggtggcggttcgagcagttccgagggtcgcggcagtcacagaaga
acatctacatcagcagatgacagaagtaaacgagtgaaaatcgaacctggagtgattgct
gtcggtgatatagacatcaatgatgtggatctgagcgatgaagaccccgagcaggagtgt
cttcgtctatttcaagaatgtgagagtcaaatgagccttaataaggataacaatggtcca
gcaaaaacgactcaagattctagcctaccggtttctgttagcgagccgtcgaaggttatt
gacatggttggggtaactcgaaaacgcattgctcacgatcctggagcccgccttgtggcg
acagtccctccggtaccgaaaaaacccttcagaccatctccagcgcaacagttggtcatg
cgccaagaggcaatgcaaagggcgcgcctaaaacagcaaaattcgtccaatgaaacgcaa
gcaacacctatctttcatcctacgaccccaactgagcagcgaagacagcgaatttgtacc
gtttcaaccgacctcgtagcggcggttgcccagcgcaaaaatctcgcattggcatcggca
aaggcgagacaggttgggattggtgctgatgcagctgccggacgatcatccactggagcg
caagttattaaaaggatcgcaaacaccgtgccattaccgcatgctacgaaccacgtgcaa
acaaagggagttgctcgagtggcccatgtagcgaaagcactgggccccagtgacaacccg
gtggcacccccgcgcccaagaatacaatttgattcgaatatgaaggttcccgttaatctc
cgccaactgtcactggataagctgatcgatttaaataatatgatttgcaccacatatgaa
gaaagttacgagaaatcactgaatgaagaacgtgacgtgtgtggccgcgcaaaggacaga
agagtttattccaacctggtagccaaccttatcatgcgtctaaagaaggaaagcggtgag
ctgggtccttcgagtacggccccacaggcagtttctcatgctgacgttcttggtggagca
aaagcaaaaaaaatgtccttttcaatcgagaaacaccgcttccgcaggaatacctcggta
gataatatgacagaagagcaattctacgaacatatgcgtgagaaataccttatgaagtca
acggaactcgaccaaatgggttttcctagaccatgcgaggggaaaccaggtaaagcagag
tttcggcatgaagctgccctttcagctcctcctgacccacgtacgggcaacgaaagaacc
tgcgttcgatgtaaaaaagtctattttgttgatagggatggaatgtacctacgacacgaa
gagtgcgtctatcactggggcaaaaattggatgcgtcatgtgaaaagaagcaatgttcgt
gagcaacagtacacatgttgtgatgctgagagcggttctgacgggtgcagtgtggctaag
ggtcacgtatttgataatccaatactcaaagaagacgggggctacatgacaaccctgact
ccggagcccgcggctgcaaacaattttaagaaggtgtacgcacttgattgtgaaatgatt
tacactacccgaggcacggaacttgcccgtgtttcgatggtcgacatgaatcttcggact
atctacgaaacaaaagtgaagcctcgaaatcctgttcttgattacaacactcgattcagt
ggtcttaaaatggaggacctggaatcagtaacgacggaattacacgaggttcaggctgcc
atgctagccctggtctcagcagacacgatcttgataggacacagcctcgaatctgattta
aaagctctcaaatttatacattcgacagtggttgatacgtcacttgtcttccctcataag
atgggcctaccctataaaagagcacttaaaaatcttctaaaggattactgccaaaagatt
attcaggatggagtggacggtcacgacagtgccgaggatgctaaggcctgtatggaactg
atgctgtataaagtaaaacaagatctcaagtcggagtaa
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integrated database retrieval system