Varroa destructor (honeybee mite): 111243850
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Entry
111243850 CDS
T07383
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111243850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vde03041
]
111243850
Enzymes [BR:
vde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111243850
Spliceosome [BR:
vde03041
]
Complex C
Other components
Step II factors
111243850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
WHD_HA2
DEAD
AAA_22
AAA_19
GIPC1_GH2
nSTAND3
AAA_16
AAA_30
Sigma54_activ_2
nSTAND_NTPase5
Flavi_DEAD
PhoH
Motif
Other DBs
NCBI-GeneID:
111243850
NCBI-ProteinID:
XP_022645793
UniProt:
A0A7M7J839
LinkDB
All DBs
Position
Unknown
AA seq
1225 aa
AA seq
DB search
MEELRKLEHLSLVSKICTELDNHLGLADKDLAEFIIHLAEKHEGYKDFRRVLCENGGGDF
PESFTQNLHRIITRMKEASKNDGFEAVATVFDDEDKRKKYPGLSIPNNIRSRTFEENDSN
DLKIAQDALAELEALAPSEEIKIEQKGFRSKSRPSEGRKKRSRSRNESRDRKRGRSRSSD
RKHDEKRSRDDSSREIRRHRSRSRDKGRSRGRSRERSRDRRIKRSRERRRSRENKRESSH
SRERPSGSGPPNRRPMLDEKPVPNKIYNGKVASIMKFGCFVSLDGVRGKCEGLVHISQLR
KEGRVTEVTEVVQRGQPVKVKVLSVTGSKTALSMKDVDQATGEDLNPVDDRVIRVVEDTA
DADSSCPGPSSRGFEGFGRLEDVDQDVDNKRKFNKISSPERWELQQMLAANCIDKSQLPD
FDEVTGLLPKDDSDGEDIEIELVEEEPAFLAGHGRQSLHDLDPVRIVKNPDGSLAQAAMM
QTALAKERRELKQQAREAEMEAAPENVKRQWIDPMPEIEGGQRTLPSAARAAPAGSQDLP
EWKKAVTAGGKATFGKRTNMSILEQRQSLPIYKLKDELIKAVSDNQILIVIGETGSGKTT
QITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTSPET
LVKYMTDGMLLRECLIDNDLSQYSLLMLDEAHERTIHTDVLFGLLKGAIQRRPELKLIVT
SATLDAVKFSSYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDI
LVFLTGQEEIDTACEILYERMKALGPQVPELIILPVYSALPSEMQTRIFEPAPAGSRKVI
IATNIAETSLTIDGIYYVVDPGFVKQNVYNPKTGMDSLVVTPISQAQAKQRAGRAGRTGP
GKCYRLYTERAYRDEMLTTPVPEIQRMDLAITVLQLKAMGINDLLSFDFMDAPPPEALIM
ALEQLHSLGALDDEGLLTRLGRRMAEFPLSPQLGKLLIMSVHLACSDEILTIVSMLSVQN
VFYRPKDKQNMADQKKAKFNQAEGDHLTLLAVYNSWKNSKFSSAWCYDNFVQMRTLKRAQ
DVRKQLLGIMDRHKLDVVSCDKNIARVQRAICSGFFRNAAKKDPQEGYRTLVDGQVVYIH
PSSALFNRQPEWVVYHEVVLTAKEYMREVTTIDPKWLVEFASSFFRFADPTKLSKHKKNL
RLEPLYNKYEEPNAWRISRTRRRRN
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacttagaaagctcgagcatctttccctcgtgtcaaaaatttgcacggaatta
gacaatcatctggggttagccgataaagatctggcagagttcatcattcacttggcagaa
aaacacgaagggtacaaggacttccgtagagtcctctgtgaaaatggtggtggcgatttt
cccgagtcatttacacagaatcttcatcgtataattactcgaatgaaggaagcgtcaaaa
aacgatggcttcgaagctgtagcaactgtatttgatgatgaggacaagcgcaagaaatat
ccaggattgtcgattccaaataatattagatctcgaacattcgaggaaaacgattcaaac
gatttaaaaatcgctcaagacgccctagccgaactcgaggccttggcgccgtcagaagaa
attaaaatcgagcagaaagggttccgttctaaatctcggccgtcggaagggcgcaaaaag
cgatctcggtcacggaatgaatcccgtgatcgtaaacgaggcagatctcgatcgtctgac
cggaagcacgatgaaaagcgatccagagatgattcatcccgagagatacgtcggcatcgc
agccgctctcgggataaggggcgttcgagaggacgctctcgggagcgatctagagaccgt
cgaataaagcggtctagggaacgtcgacgatctcgagagaacaaacgggaatcgtcgcat
tctagggaacgtccatcaggaagtggacccccaaacaggcgacctatgttggatgaaaaa
ccagtaccaaataaaatatacaatggaaaagtagcgtctataatgaaatttggctgtttc
gtatcgctagatggagttcggggcaagtgtgaaggattggtgcatatttcgcagctccga
aaggagggtcgagttactgaggttactgaagtcgtacagcgaggccagcctgtaaaagtt
aaggttctgtcagtgaccggtagtaaaacggcgctatcaatgaaagacgttgatcaagca
accggagaagatctaaaccccgtagacgaccgggtaattagggttgtggaggatactgcg
gatgcagacagcagctgtcctggtccaagtagccggggcttcgaaggcttcggacgtctg
gaggacgtcgatcaggatgtcgacaacaagcggaagttcaacaaaatttcatcgcccgaa
cgctgggagttgcaacagatgctagcggcaaactgcatcgataaatctcaattacctgat
ttcgatgaggtaacgggcttgctaccgaaagatgattccgatggggaggacattgagatc
gaattggtcgaagaagagccagcttttttggcgggacacgggaggcaatcgctccatgat
ctcgatcctgtacgcattgtgaaaaatcccgatggatcgctggcgcaagctgccatgatg
caaacggctttggctaaagaacgtcgtgagctaaagcaacaggcccgcgaagctgaaatg
gaagctgcgcctgaaaacgttaagcgacaatggatagacccaatgcctgagattgagggt
ggtcaaagaacacttccaagtgctgctagagcagccccggccggttcgcaggaccttccc
gaatggaagaaagctgttactgctggaggtaaagccacattcggaaagcgaacaaacatg
agtattttggaacagcgtcagtcactgccaatctacaaactcaaggatgaactcattaag
gccgtctccgataaccaaatacttattgttattggtgaaaccggttcgggaaagacgacc
caaattacgcaatatttagccgaagcgggatttactgctcgcgggaaaattggatgcacc
caaccacgtcgagtggctgccatgtcagtagcaaaacgtgtatcagaagagttcggttgc
cgcctcggacaagaggtgggttatacgatccgctttgaggactgtacctcaccggaaacc
ttagtgaagtacatgacagatggtatgttattgcgtgaatgcctcatcgacaacgatcta
agccaatattcgttgcttatgcttgacgaagctcatgaacggactattcatacggacgtg
ctgtttggtttactcaaaggagcgatacagagacgccctgagctgaagctgattgtcacg
tcggccactctagacgctgtgaaattttcgtcgtatttctttgaggcgcctattttcacc
atccccggacggaccttccctgtcgaggtgttgtatacaaaggagccagaaacagattat
ctggatgcatcgttaattacagtgatgcagattcatctgacagaacctcccggagatatc
cttgtattcctgactggtcaagaagaaatcgatacagcctgcgaaattctttatgagcgt
atgaaggcccttggacctcaggtccccgaactcatcatcctgcccgtgtactcggcgctg
ccatctgaaatgcagactcgaattttcgagcctgcccctgctggctcgcgtaaagtcatt
atcgccacaaatattgctgagacatcgctaaccatcgatggtatctattatgtggtggac
cccggttttgttaaacagaacgtttataatccgaagactggtatggactcgcttgtcgtg
acgcccatatctcaagctcaagcaaaacagcgggcaggccgcgcaggccgcacgggacca
ggcaaatgctatcgactctatacggagcgcgcctatcgggacgaaatgctaaccactcca
gtacctgaaattcagcgaatggatttggccattacggtgttgcaactaaaggcaatgggc
atcaacgatctcctgtcgtttgactttatggatgccccgccacctgaggcgttgattatg
gcgcttgaacaacttcactcgcttggagccttagacgatgaaggcttgctcacgagactt
ggacgaagaatggctgagttccctctgagcccgcagctgggtaaacttttgattatgtca
gtacatttggcatgttcagacgagattctgaccattgtctcaatgctgtccgtgcaaaac
gtattctaccgaccaaaagacaagcaaaatatggctgaccagaagaaagccaaattcaat
caggccgaaggtgatcacctcacactgctagcagtgtacaactcatggaagaattcgaag
ttcagctcggcctggtgctatgataactttgtacagatgagaacccttaaacgagcccag
gacgtccgtaaacagctgttgggtatcatggatcgacataagttagatgttgtttcctgt
gacaaaaatattgctcgagtacagagggctatttgttcaggctttttccgaaacgctgcc
aaaaaagatccgcaggaaggatacagaacgctcgttgacggacaggtcgtgtacatacat
ccaagcagcgctttgttcaaccgacagcccgagtgggttgtgtatcatgaagtggtcctc
actgccaaggagtacatgcgggaggtaacaactattgatccgaaatggctcgtcgagttt
gctagctccttcttccggtttgccgacccaacaaagctgtcgaaacacaaaaagaacctc
cgcctcgagccgctttataacaaatacgaagagccaaacgcttggaggatctcgcgaact
cgcaggaggcgcaactaa
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integrated database retrieval system
