Varroa destructor (honeybee mite): 111245239
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Entry
111245239 CDS
T07383
Name
(RefSeq) eukaryotic initiation factor 4A-III isoform X1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03013
Nucleocytoplasmic transport
vde03015
mRNA surveillance pathway
vde03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111245239
09122 Translation
03013 Nucleocytoplasmic transport
111245239
03015 mRNA surveillance pathway
111245239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vde03019
]
111245239
03041 Spliceosome [BR:
vde03041
]
111245239
03009 Ribosome biogenesis [BR:
vde03009
]
111245239
03012 Translation factors [BR:
vde03012
]
111245239
Enzymes [BR:
vde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111245239
Messenger RNA biogenesis [BR:
vde03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111245239
mRNA cycle factors
Stress granule specific factors
111245239
Spliceosome [BR:
vde03041
]
Complex C
Other components
EJC/TREX
111245239
Ribosome biogenesis [BR:
vde03009
]
Eukaryotic type
90S particles
Helicases
111245239
Translation factors [BR:
vde03012
]
Eukaryotic type
Initiation factors
eIF-4
111245239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
TniB
AAA_30
Motif
Other DBs
NCBI-GeneID:
111245239
NCBI-ProteinID:
XP_022649066
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MAYRGKKQSPDEAMANLEFETSDGVEVINSFDAMGLREDLLRGIYAYGFEKPSAIQQRSI
APIVSKRDVIAQSQSGTGKTATFSIGVLQSLDTQVRETQVLILSPTRELALQIQKVILAL
GDYMSVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVYDMIKRRNLRTRGIKMLVLDEA
DEMLNKGFKEQIYDVYRYLPPGTQVVLISATLPHEILEITNKFMTDPVRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLSQKMLEANFTVSSMHG
DMPQKERDAIMKEFRAGSTRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVKSDDIRILRDIEQYYATQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcataccgaggcaaaaaacagagtccagatgaagctatggccaacctcgagtttgaa
actagcgacggtgttgaggtgattaattctttcgacgcaatggggcttcgtgaggacctc
ttgcgtggcatttatgcctatggatttgagaaaccttcagctattcaacaacgttcaatt
gcaccaatcgtaagtaaacgcgatgtcattgctcagtcacaatccggaaccggaaaaact
gccacattctcgatcggtgttcttcagtcacttgatacgcaagttcgtgagacacaggtt
ttgatactttcaccgacacgtgaattggcccttcaaatccagaaggtcatattagcgtta
ggtgattacatgtctgtacaatgccatgcgtgtattggaggaacgaatcttggcgaggac
atccgcaaattagattatggccagcatgttgttagtggaacgcctggcagagtttatgat
atgattaagagacgtaatctgcgcaccagagggattaaaatgctggtattagacgaagcc
gatgaaatgctcaacaagggtttcaaagaacaaatctacgacgtctaccgttatctaccc
cccggcacacaagtagttcttatctctgctacgcttcctcatgaaattctcgagattacc
aacaaatttatgactgatcccgtgcgcattctcgtgaaacgtgatgaattgacactcgaa
ggcatcaaacagttcttcgtagcggtagaacgtgaggagtggaaatttgatacactttgc
gacctttatgatacattaacgattacacaagccgttattttctgtaatacgaaacgcaaa
gtagattggctctctcagaagatgctagaggcaaactttacagtgagctcgatgcatggt
gacatgccgcaaaaggaacgtgacgctatcatgaaagagtttcgcgcaggaagcactcga
gtcctcatcacgacggacatttgggccagaggaatcgacgtacaacaggtctcccttgtc
attaattatgatctaccgaacaatcgagaactgtatattcaccgcattggacgttcaggc
cgttttggccgtaaaggtgtagctattaatttcgttaaaagtgacgatattcgaatctta
cgtgacatcgagcagtattatgctacgcagattgacgaaatgcccatgaacgtcgccgac
ctcatctaa
DBGET
integrated database retrieval system
