Varroa destructor (honeybee mite): 111245395
Help
Entry
111245395 CDS
T07383
Name
(RefSeq) transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111245395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vde03021
]
111245395
03019 Messenger RNA biogenesis [BR:
vde03019
]
111245395
Transcription machinery [BR:
vde03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111245395
RNA polymerase I system
111245395
Messenger RNA biogenesis [BR:
vde03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
111245395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
Spt5-NGN
KOW5_SPT5
KOWx_SPT5
KOW2_Spt5
KOW6_SPT5
KOW1_SPT5
Spt5_N
KOW7_SPT5
Motif
Other DBs
NCBI-GeneID:
111245395
NCBI-ProteinID:
XP_022649449
UniProt:
A0A7M7M4Z2
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MSDSEGSQLSENRSNRGSENEESGDEASTSRPQPKKRSRYDDDDEEEEEEDDNYDDEDDE
EETRRKKKKSRGRGFLIEEAEVDDEVEDDEEWEEGAEELLDKAGRSRGPALLDDDLGGRD
GDRHSHRRLQMMLDSKPDEIEDYYRRKYADRSEQYGFRGDQGDVDLDDDIAQQTFQPSVK
DPMLWMVRCRLGEEKATVLQLMRKFIAYQNTEQPLQIRSAVAPENVKGYVYIEAYKHTHV
KAAIEGIGNLKMGSFEQKMVPIKEMTEVLRVTKQQAVLTRGQWVRLKRGIFKDDLAQVYH
VEQAQNRVELKMIPRIDYTKPRGAFKNNVDAEKKRKFKKPPQKLFDVDAIRHAGGDVSTD
GDFLIFEGNRFSRKGFLFKAFIMSAILTEGIKPTLEELQKFDAQPENLEMDLGERAGGIE
SSELFAPGDNVIVCDGELVNLQGKVITVDGNKVSMLPKHEDLNEPLEFQANELKKFFKAG
DHVKVLNGRFEGDTGMILRVENELAILFSDVTCHELKVRTKNLQLCADTATGVDAYGQYQ
WGDLVQLDAQTVGVIVRLEKEHFQVLAQTGNVISVKHQKITRKCDSKKAVALDSEQNQIH
VKDIVKVTDGPHSGRTGEVRHIFRIHAFLHSRLMTDNGGIFVCKTRHLTLAGNKIRTTSS
GPGALPMGGFSPLSPRIGSPMHPSSGMGMKSPMRSPAQGPSHSRAAQQNKRDLHLIGKTI
KITKGPYKGHYGIVKDATQSATRVELHSKCQTISVDRARIEPVTGPAGRAPGGASSYVRT
PSYGSQTPMYGNQTPMHGSRTPMQGSQTPLYEPGSRTPHYTGSETPRHDGSRTPQHHSSA
WDPSSTPARHDDLDDYEEPSPSPSYNPATPGYQPETPQVGGPFTPQTPGGLYGAGSSHDA
GASYSPYQGTSPSPSGAGGYPVPSPGNSMGMTPSPLGYNNPSVQYNPMGFSPMTPGVAAS
PFNPATPGGGMGIGGLADPVEWQAVDLECRIRAMEHKDKGLVGQQCIITGISGSVCSVLL
LKEARVISVDSHYLEPVRPRENDKCKIISEGEEEGVVVDIKDDNDVVVLVGDRHRKYRMQ
DLCKLGSKDQYSNA
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaaggcagccagctttcggaaaaccgtagtaatcgaggaagtgagaat
gaggagagtggagacgaagcctcaacaagtcgaccgcaacccaaaaaacggtcccgatac
gacgacgacgacgaagaagaggaagaagaagacgataactacgatgatgaggatgatgaa
gaggaaacccgtaggaaaaagaaaaaatctcgtggccgaggtttcctcattgaggaggct
gaggttgatgacgaagttgaagatgatgaagaatgggaggaaggagctgaagaactccta
gacaaagctgggaggtcacgagggcccgctctccttgacgatgatctcgggggacgggac
ggagaccgtcacagccatcgacggctgcagatgatgttggatagcaagcctgatgaaatt
gaggattattaccggcgaaaatatgctgatagaagcgagcagtacggatttcgaggtgat
caaggtgacgtcgacttggatgatgatattgcacaacagacttttcaacccagtgtgaag
gacccgatgttgtggatggttcggtgtcgcctgggtgaagaaaaggcgacagttttacag
ttaatgcgtaagtttattgcataccaaaataccgaacaaccgctgcagattcgttcagcc
gtagcacctgaaaacgtgaagggctatgtctatatcgaggcgtacaaacatacacacgtc
aaggccgcaatagagggaatcggcaatctcaaaatgggctcatttgaacaaaaaatggtg
cctataaaggaaatgactgaagtgctgcgtgtgaccaaacagcaagctgttttaacccgg
ggtcaatgggtgcgacttaagagaggaatctttaaggacgatttagctcaggtgtatcat
gtggaacaggcccaaaatcgtgtcgaattaaagatgataccaagaatcgactacacaaag
ccgcgtggcgcttttaaaaacaatgtcgatgccgaaaagaaacggaagttcaaaaagcct
ccacagaagttatttgatgtagatgccattcgtcatgcgggtggagatgtgtctacagat
ggtgattttctcatttttgaaggcaatcgtttttcacgcaagggatttttgttcaaagcg
tttattatgagcgcaattctcacagaggggataaaaccaacccttgaagaattgcaaaaa
tttgatgctcaaccagagaatcttgaaatggacctcggagaaagagcaggcggcatagag
tcatccgaattgttcgcgccgggtgacaatgtgatcgtctgcgacggcgagctggtaaac
ttgcaaggtaaagttattaccgtcgatggtaacaaagtatctatgctaccgaaacatgaa
gatctgaacgaaccgctagagttccaagctaacgaactaaagaagttctttaaggcaggt
gaccatgttaaggttttaaacggtcgctttgaaggagataccggcatgattcttcgggtc
gaaaatgaacttgctattttgttttcggatgtcacttgccatgagctcaaggttcgcact
aaaaatttacaactgtgtgccgataccgccactggagtagatgcctatggacaatatcaa
tggggtgatcttgtgcagttagatgcgcaaacggtcggagttattgttcgacttgaaaaa
gaacattttcaagtgttggctcagacaggcaatgtcatttcagtgaagcaccaaaagata
actcgcaaatgtgactctaaaaaggcggtggcacttgactctgaacaaaatcagatccat
gttaaagatattgtgaaagtaactgatggtccacattcaggccgaacgggtgaagttaga
catattttccgtattcatgcctttttacattcacggttaatgactgacaatggaggtatc
ttcgtttgtaaaacccggcatcttacattagccggaaacaagataagaactacttcttct
gggccaggagctcttccaatgggaggtttttctccactttcaccgcgtattggtagtcct
atgcatccgtcatcaggcatgggcatgaagagtcctatgcgttcgccggcgcaaggccct
agtcacagtagagctgcccagcagaacaagcgtgatctacacttgattggaaagacaatt
aaaatcactaagggtccatacaagggccattatggcatcgtcaaagatgcaacgcaatca
gccactcgggtagaactacactcaaaatgccagaccatctctgtcgatcgcgcacgtatt
gagcctgtcactggccctgctggtcgggctccagggggagcttcatcatatgtacgtaca
ccatcgtacggcagtcaaacaccgatgtatggtaatcagacgccaatgcacggctctagg
acgcccatgcaaggatcccaaacgccgttatatgagccggggagccgtactccgcattat
actggttcagagacacctcgccatgacggctcacgaacccctcaacaccacagctccgcg
tgggatccgtcatcaacaccggcacgccacgatgacctggacgactatgaagagccttcg
ccgtcgccgtcgtataatccagccacacccggttaccaacctgaaacgccacaagtcggc
ggacccttcacaccgcaaactcccggtggcctttatggcgcgggaagcagccatgacgca
ggtgcatcatattcgccgtaccagggaacatcgccatcgccttcaggcgcaggtggttat
ccggtgccatcccctgggaactcgatgggtatgaccccatctccactaggctacaacaat
cccagtgttcagtataaccctatgggcttttcaccaatgacacctggagttgcggcaagt
ccgtttaatccggccactccaggcggtggtatgggaataggcggtttggctgatcctgtc
gagtggcaagctgttgatcttgaatgtcgtatccgagccatggaacacaaagacaagggt
ctcgtcggacaacagtgtattattacaggcatatcgggaagcgtctgttcagtgcttctg
ttgaaagaggcgcgtgtcatcagcgtcgattcccactatttagaaccggttcggcctcgt
gagaacgacaagtgtaagatcatctccgaaggcgaggaagaaggagttgtggttgatatt
aaggatgacaatgatgtcgttgttctcgtcggtgaccgtcaccgaaagtaccgcatgcaa
gacctttgcaaactaggcagcaaggatcaatactcgaacgcttag
DBGET
integrated database retrieval system
