Varroa destructor (honeybee mite): 111246041
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Entry
111246041 CDS
T07383
Name
(RefSeq) protein SMG5-like
KO
K11125
protein SMG5
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111246041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vde03019
]
111246041
03032 DNA replication proteins [BR:
vde03032
]
111246041
Messenger RNA biogenesis [BR:
vde03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111246041
mRNA cycle factors
Common to processing body (P body) and stress granule
111246041
DNA replication proteins [BR:
vde03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
111246041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Nop14
Motif
Other DBs
NCBI-GeneID:
111246041
NCBI-ProteinID:
XP_022651003
UniProt:
A0A7M7JFL8
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MEAGDISKKHLRALCDAVRRAESSQDDILLRQRVKEYAEKLMFSSPLEFGRQAEDILWKK
AFYEPVARFKSKRDQMSPLQQRLIEQLLLSGLGTYQQVLSRLELDFGAPLIGIIDAALSR
VGWDVTIGRRVNEFPVEQHSELREWALQCAYRCLLALGDLSRYLHDLCGQGTSGVSPHRS
AAFRFYHQAVLVRSSQGQPYNQLGTLTKGELAGLKETYFYFRCLLSSEPFAGAKNNLNLL
FDKNRTALVMKGGMPTGGWENSIRALLSVSELLWQGEVPKPTMTAFVIRSLQYDQPLRRD
AQFYALLLLLALDRKLTRNNRTRNEKELSASWKVVRDLLFALGGRLIQELHHCLCLRTCS
KHPFNEIREVNHSLVIMDGQQNNCIIPAGQKNGSSGDSGSGSFKRLSSKPKIVRRRRAFG
EGDSEDEDDNGGRGAGDGGPYANRTGEPDSDDDLQSQVQETEQLKLNGGSTKQMNGQTKD
KAPDDGGESSDDSMSTGWSSSSDEDDESEDETSDDTFDPHTNDEFDRRASQRSDSGGRDK
ANGGKLPSPRLSPLYTLDKALSCRQLVKQVASEELLPAAKLFLDWLVLLSNDARKGKNSE
DDQGKKEGQTPSGLPLRVLKYVADLANLLCVLKHRVMHGSDSTIEHVRNRLNELSAQNAV
RKSDGSNETTLTTDTKDSYRKEFILPEDIHFSLKASPALRTSAICKKSEENAELIQVEYD
WILSWEERSSLATAGQRAVYAYPQVAFFRTCKASIRRISG
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggaggccggcgacatatcaaaaaagcatttaagagccttatgcgacgcggttcgacgg
gcagaaagctctcaggatgacattcttttacgacagcgcgtcaaggaatacgctgagaaa
ctaatgttctcttcgccattagaatttggtcgtcaagccgaagatatcctttggaaaaag
gcattttatgagcctgtagcccgctttaaatctaagcgggaccagatgagtccactacaa
cagcggttaatcgagcagctgctcctttctggtcttggaacatatcagcaagtgctttcc
agattggaacttgacttcggcgccccactcatcgggatcattgacgccgctctcagtcgg
gttggctgggatgttacgattgggcgcagagtaaacgaatttccggtggagcaacatagt
gaactccgcgagtgggcccttcagtgtgcctaccgatgtcttcttgcgcttggcgacctc
tcccgttaccttcacgatttatgcggacaaggaacaagtggtgtctctcctcatcgatcg
gcggcattccgtttttatcatcaggccgtcctggttcgctcatctcagggacaaccttat
aatcagttggggacactgactaaaggggagctcgcgggcttgaaggaaacatacttctat
tttcgatgtttgcttagctcagaaccatttgcaggcgcgaagaataatctgaacttgtta
ttcgacaaaaatcgcaccgctttagtcatgaaaggaggtatgccaactggcggttgggaa
aacagtattcgcgcattactttcggtctcggaactactgtggcagggggaagtcccgaag
cccaccatgacagcgtttgttataaggtccctccaatacgaccagccgcttcgtcgtgat
gctcagttctacgcattgcttctactgttagcgctagaccggaaactcactagaaataac
aggacaagaaacgaaaaggaactgtcggcctcatggaaagttgtgcgcgatttactcttt
gcgttgggtggccgactcattcaggaactgcatcattgcctttgcctgcgtacctgctcg
aaacatcccttcaatgagatacgcgaagtcaaccattccttagtcatcatggacggacaa
cagaacaattgcattattccagcgggtcagaaaaatggatcttcaggtgattccggctcg
gggagctttaaacgcctttcatcaaagcccaaaattgttcgtcggaggagagcattcggc
gagggtgattcggaagacgaagatgataatggaggacgaggtgctggtgacggcggtcca
tatgcaaatcggaccggtgaaccagattccgacgatgatttgcaaagccaagtgcaagaa
acagaacagcttaagcttaacggcggctcaacgaagcaaatgaatggtcaaacaaaggac
aaggcaccggatgatggaggtgaaagttctgatgattcgatgtctactggttggtcgagt
agttcggatgaggatgacgaatctgaggacgaaacgagtgacgacacgtttgatccacac
actaacgacgagtttgataggagagcatcccaaagatctgattctgggggtagagataaa
gcaaatggaggaaagctgccttcgccgcgtctgtcgccgttgtatacgctagataaggcg
ctcagctgcagacagctcgtcaaacaggtggcctcggaagaacttctacccgcagcaaag
ctcttcttggattggttggtgctcttgtcaaatgacgctcggaaaggcaagaatagtgaa
gatgatcagggcaagaaggaaggacaaactccctctgggcttccgttacgtgttcttaaa
tacgtagctgacctagctaatttattgtgcgtgcttaaacatagagtaatgcatggatca
gacagtaccatcgagcatgtccggaatagactcaacgaactatccgcccaaaacgctgta
agaaaatcagacggtagcaacgagacgacactcacaaccgatacaaaggattcatataga
aaggagtttattcttccagaggatattcatttctcgctaaaggcttccccagctttaagg
acatcagcaatctgcaaaaagtcagaagaaaatgctgaactgatccaggttgagtatgat
tggatactcagctgggaggaacgatcaagtcttgcaactgcgggccaacgagccgtctac
gcttacccacaagttgccttttttaggacatgtaaagcttcgatcaggagaataagtggg
tag
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