Varroa destructor (honeybee mite): 111246252
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Entry
111246252 CDS
T07383
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111246252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vde03019
]
111246252
Messenger RNA biogenesis [BR:
vde03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111246252
mRNA degradation factors
3'-5' decay
Pan complex
111246252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
Torus
zf-CCCH_4
Pkinase
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
111246252
NCBI-ProteinID:
XP_022651277
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MSSKSTAVCRYFASGGTCFYGNECQFIHGTPDRISNKQQQQQHGPPHQPPPPHSQQQHSQ
HHSSPHQQPNQGSNNDSLLSEEVLFTGYDLPAESKLSSYICPVQTTRSPMRAASVVSDVP
HSAMGYRADASIVNSNAGFLRPLQATRMPKEAPLATSLSNLSMQDVNAQEFVPVSSRGSS
SSLNNVSSQPMTHSLSAPIGAFSKSGPAGHLLRDRDSPDNSPVIARRSYIRNPSPLTVNG
GEYATPTGMYQESLGGTTYFYQPAGGNGDENGGESTALGVTPDTAVAEMTTAATGGLATA
SGVPIASAPEMIPPAFHMFPGPPAHVEHMKPKANAPSFFMSDELRLELLSRAALLNSRVN
AEFFPDLPQHIDAYTNICPLETQVNKSHCYGYVTSVYRATNVKTGLVYCLRRIHGFRLSS
TKTIIEIIDHWKKIQHSNLVQLRELFTTKAFGDNSVVFVYDFFAGAQTMKQVYFNGLGAS
GAGNGSGASGAAGGYNTTPATHNGMGQQQAKNRVGGRGLQQHPDGSLRQGHGLLPESLIW
TYVVQLSSALRTVHAANLAIRCLDPSKVLLSSAGKSRLRLNCAAIVDVITLDSAQAGGGA
GNQRTAAMVHCYQKEDLAHLGRLILCLACNSSSAYQFVESSMELVTKNYSSDLRNLLVLL
LSMPPRVSSINDVMPMIGARFYTQLDAAQMRGDVLEAELAKEVDSSRLFRLLVKLGAINE
RPELNIDTTWSETGDRYMLKLFRDFLFHQCTKEGQPWLDMAHVVQCLNKLDAGVEDKICL
VSRDEQNVLVVSYAELKRCIESAFREIYDKMQ
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaagtcgacggccgtgtgccgctatttcgcctcgggaggcacctgcttctac
ggcaacgagtgccaattcattcatggaacccccgaccgaatttccaataaacaacaacaa
caacaacatgggccgccacatcagcctccaccgcctcactcgcagcaacagcattcccag
caccattcgtcaccccatcagcagccgaatcaaggcagcaacaatgattccctgctatcg
gaggaggttctgttcacaggctacgatttgcccgcggaatccaagctcagttcttacatc
tgtccggtgcaaacaacacgctcgccaatgcgcgccgcgtccgtggtcagcgacgtgcca
cactcggcgatggggtatcgagccgatgcgtcgatagttaattctaacgccggcttttta
cggccgctccaggcgacgcgaatgcctaaggaggctccgttggccacgtcgctatcgaac
ctctccatgcaagacgtcaacgctcaggagttcgtgccggtttcatcaagaggcagttcg
tcgagtctaaacaatgtctctagccagcctatgacacactcattgagtgcgcccattggc
gcattcagcaaaagtggtcccgctggacacctattaagggatcgggatagccctgacaat
tcgccagtgattgcccgcaggtcatacataaggaatccttcgccactaaccgtcaacgga
ggggaatatgctactcccacgggcatgtatcaagaatctttgggaggtacaacctacttc
taccaaccggctggcggtaacggagatgaaaacggaggtgaatcaactgcacttggggta
acaccagacacggctgtcgcggaaatgactactgcagctactgggggtctggctactgca
agtggagtaccaattgcatcagcccctgaaatgatacctcccgcgtttcacatgtttccc
ggtccgcccgcccatgtcgaacatatgaagccgaaagccaacgcgccatcatttttcatg
tccgatgaactgcgtctagaacttcttagtagggctgcgttgttgaactcacgagtaaac
gcagagtttttccctgatcttccacaacatatcgacgcgtatacgaatatttgcccgtta
gagactcaggtgaataagagccactgttacgggtacgtcacctcggtgtatagggcaact
aacgttaaaaccggactcgtctactgtctacgtaggatacatggctttcgacttagttcg
acgaagacgatcattgaaattattgatcactggaaaaagattcaacattcaaacctcgtt
caactacgggaattgttcacgacgaaagcgtttggcgacaactcggttgtgttcgtatac
gacttctttgcgggagcgcagacaatgaagcaggtgtatttcaacgggctgggggcctcg
ggagcaggaaatggtagtggggcatccggcgctgcaggtggctacaatacaacgcctgca
actcacaacggcatgggccagcaacaggcaaagaaccgagtcggtggccgcggccttcag
caacacccagatggctcgctacggcaaggtcacggtcttctacccgaaagcctcatctgg
acatacgttgtacaacttagttcggctttacgcaccgttcatgccgccaatcttgccatc
agatgcctcgatcccagcaaggtactgctaagctcggcgggtaagtcccgcttacggctg
aattgtgctgccattgtagacgtgatcacattggattctgcacaagctggcggcggagct
ggaaaccagcggaccgcagcaatggtacattgttatcagaaagaagacctagctcaccta
ggcagacttatactctgcctggcgtgtaattcgtcctctgcgtatcagtttgtggaatcg
tcaatggagttggtgactaagaattattcatctgatctgcgcaatctgcttgtgctacta
cttagcatgccgccacgagtgtcttcaatcaacgacgttatgccaatgattggagcacgt
ttctacacgcaactggacgctgcgcaaatgcgtggcgacgtccttgaagccgagttggcg
aaagaggttgatagtagccgcttgttccgcctacttgtcaagcttggcgcgatcaacgaa
cggccagaacttaatattgatacgacgtggagtgaaactggcgaccgttatatgttgaag
ctcttccgcgactttcttttccaccagtgcacaaaggagggccaaccctggctagatatg
gcccatgttgtgcagtgcctaaacaagcttgacgctggtgtagaggacaaaatctgtctg
gtttcacgcgacgaacagaacgtcctcgttgtgagctacgccgaattaaagcgctgtatt
gaatcggcatttcgcgaaatctatgataagatgcagtaa
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