Varroa destructor (honeybee mite): 111248346
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Entry
111248346 CDS
T07383
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111248346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vde03019
]
111248346
03036 Chromosome and associated proteins [BR:
vde03036
]
111248346
Enzymes [BR:
vde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111248346
Messenger RNA biogenesis [BR:
vde03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111248346
mRNA degradation factors
5'-3' decay
Decapping complex
111248346
Chromosome and associated proteins [BR:
vde03036
]
Eukaryotic type
Gene silencing
piRNA pathway
111248346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Mtr2
Motif
Other DBs
NCBI-GeneID:
111248346
NCBI-ProteinID:
XP_022656267
UniProt:
A0A7M7JUH1
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MVVEVTPTSNIIDESNMKALQIEDGDWRKGLKVPPKDRRVRTTDVTDTKGTSYEDFCLKR
ELLMGIFEMGWEEPSPIQEEAIPMAKMGRDVLARAKNGTGKTGAYSIPVLNAIDDKMDSI
QALILVPTRELALQTAKVCLQLAKHTLVKVGVLIGGNLVQDDVKRAHHGAHVLVATPGRA
LDILKHNDICCDNIDKVVLDEADKMLSKGFLQATEELMELLPKRKQILLFSATFPMEVQS
FVKKYCSKDCKIINKMTELTLKGVTQYYAYVHESQKVHCLNTLFSRLRINQAIIFCNSQQ
RVELLAKKITDLGYSCYYIHSKMQQQHRNRVFHDFREGQCRNLVCTDLITRGVDVQGVNV
VINFDFPHHTETYLHRIGRSGRFGHLGIAVNLITEKDRDNLVMVERELNTRIEPIPKQID
TKLYVAESHLDSVDSQLDTM
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggttgttgaagttacacccacttcaaatattattgacgagagcaatatgaaggctcta
caaatcgaagatggggactggcgtaaaggcctgaaggtacccccaaaggatcgtcgcgta
cggactacagacgttaccgacacgaaaggcacatcttatgaggacttttgtttaaaacgt
gagcttctaatgggcatttttgaaatgggttgggaggaaccttcgcctattcaggaagag
gctatccctatggcaaaaatgggccgagacgtgctagccagagcaaagaacggaactggt
aaaactggtgcatacagtattccagtacttaatgcgatagatgacaaaatggacagcata
caggctctaattttggtcccaacccgtgagctggctttgcagacggctaaagtatgtttg
caattagcaaaacataccctcgttaaagtcggtgtgttaattggtggtaaccttgtacag
gacgatgtaaaacgggcacatcatggtgcacatgtgctggtagctaccccgggccgtgcc
ctcgatattctcaaacacaatgacatctgttgcgacaatattgataaggttgtgcttgat
gaggctgacaagatgctatcaaaaggcttcctacaggcgaccgaagaattgatggagcta
ctgccgaagcgcaagcaaattcttctgttctcggcaacgttcccgatggaggtgcagtcg
ttcgttaagaagtactgcagcaaagattgtaaaattatcaataagatgaccgagttaacc
ctcaaaggtgtcactcaatactatgcgtacgtccatgagagccaaaaggtccattgcctg
aacacgttattctcgaggctgcgaatcaaccaggcgattatcttttgtaattcacagcag
cgcgtcgagctgctggcgaagaagatcactgatttgggttattcatgctattatattcat
tcgaagatgcagcaacaacaccgcaatcgagttttccacgactttcgtgaaggtcaatgt
cgtaacctcgtttgcaccgatctgatcacccgcggtgttgatgttcagggagtgaacgtc
gttatcaactttgactttccacaccatacagagacgtatctgcatcgtatcggccgatct
ggtcgattcggccacctgggtatcgccgtaaacctcatcactgagaaggaccgtgacaac
cttgtcatggtcgaacgcgaactcaacactaggattgaacctataccgaagcagattgac
accaaactatacgtggcggaatcgcacctcgattcagtggactcgcagcttgacacgatg
tag
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