Varroa destructor (honeybee mite): 111248471
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Entry
111248471 CDS
T07383
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111248471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vde03041
]
111248471
Spliceosome [BR:
vde03041
]
Complex A
U1 snRNP components
U1 related factors
111248471
Complex B
111248471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
WW_2
Glyco_hyd_101C
Med19
Leu_Phe_trans
Motif
Other DBs
NCBI-GeneID:
111248471
NCBI-ProteinID:
XP_022656645
UniProt:
A0A7M7JTQ6
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MDPHLLAAGIMPTFPAGVPAFVGFNPAAAPAYPQVPSAPVQIPLPGDAPTNVVAAPTSVA
AAVAAGSPANPTEAPLPPATPSVGASDTTQTGNTAQCDWTEHTSPDGRIYYYNSVTRKSS
WDKPDELKSSTELLLSRCPWKEYKSESGRLYYYNAETKESKWSIPKELEDIRRLLEMEGK
VKTAVRLELPNSASGTPTINSPVASVEQPPIDEASRTSFAPDDDSQSNQDGAVVKLEYKD
KREMADAFRVLLRERNVASNASWENAVKAISQDPRYAALKKLPDRKQIFNLYKTQRAKEE
KEEQRMKIRKAKEDLEQFLLNSPQLNMNVRYKKAYELFGHLPVWTAVGDRERKELYDDIM
TIVTKRDKEAQRALRKKNMATLADILDAMAEVTHRTTWQEAQQLLLDNPTFAEDAELLGM
DKEDALTIFEDHIRELEKEHEAEREREKKVLKRSQRKAREGFQALLADLHDKGKLTSMSL
WSELYPVIRSDPRFNNMLGQPGSTPLDLFKFFVAELKDRLIDEKKIIKEILREKNFTVEV
DTQFEQFVTVISEDKRSATLDAGNVKLTYTALMEKAAAREKERLREEQRKVKRAEAAFRS
ILRNLSPPVEYDSSYDKIRPLIESHPDFNGLLLESERVRVFKEYTTALEEACSHHHGRSK
KSKKNTKHKRNRSSSRSSVTSISSSSGGSSRKKKKKKKSRYQSRSPSPSLKKSRYLEASP
SPSKRFSPVEDESESGYKASEKYRHYREATPEEGEVTHREADEAMLSERELEDRRRELLA
QLHSGATEDVSD
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggatccacacctattggctgccgggattatgccgacgtttccggcaggagtaccagcc
ttcgtcgggttcaatcccgccgcggcaccagcgtacccacaagtgccgtccgctccggtc
caaatacctcttcctggtgatgcacctactaacgttgtggcggcgccaacatcagtagca
gctgctgtagccgcaggatctcccgcgaatccaacggaggctccattacctccagcaaca
ccttcggtcggcgcgagtgataccactcaaactggcaatacagctcagtgtgactggaca
gaacatacttcgccagatggccgaatatactattataattcagtaacgagaaagtcatcg
tgggacaaaccggatgagttgaaatcatcaaccgagcttcttctctcgcgatgtccttgg
aaagagtacaaatcggagtctggccgactgtattattacaatgccgaaactaaagagagc
aaatggtccattcctaaagaactcgaggacatccgacgtcttctcgaaatggaaggaaag
gtcaaaacggctgtcagactcgagctccctaattctgcgtcgggaacgccaacaattaat
tccccggtcgcatcagttgaacagccgcccattgatgaggcatcgcgcacgtcttttgca
ccggacgatgactcacaatcgaaccaagatggcgcagtcgtaaagttggaatacaaggat
aagagagaaatggcggatgcgtttcgagttctcctccgagaacgtaatgtggcaagtaat
gcatcgtgggaaaatgccgttaaagctatttcacaagatccccgctatgcagctctaaaa
aaattgccggatcgcaaacagatttttaatttatataaaacacaacgcgctaaggaagag
aaagaagagcaacgaatgaaaattcgaaaggccaaggaggatcttgaacaatttttgcta
aactcgccacagctcaatatgaatgtcaggtacaaaaaagcgtatgagctcttcggacat
ctacctgtttggacggcagttggcgatcgggaacgtaaagaactatacgatgatatcatg
actattgtaaccaaacgtgacaaagaagcccagcgagcgttacgtaagaagaacatggct
actcttgcggacattctcgacgcaatggcagaagttacccacaggacaacgtggcaagaa
gcacaacaactgctattagataatcctacttttgcggaagacgccgagctgctaggcatg
gacaaagaggatgctttgacaattttcgaggatcatatccgagagcttgaaaaagagcat
gaagctgagcgagagcgtgagaaaaaggtgctaaaaaggagtcaacggaaggcccgtgag
ggctttcaggccctcttggctgatttgcatgacaaaggcaaactcacatcaatgtcattg
tggagcgaactgtatccggtcattcgtagcgatcctagattcaacaatatgcttggccaa
cctggttcaacgccgctcgacctttttaaatttttcgttgctgagctcaaagatcggctc
attgatgagaagaagataattaaggagatattgcgggagaaaaatttcaccgtagaagtt
gatacacagtttgagcagtttgtcacggtgatatcagaagataaacgcagcgcgactttg
gacgctggcaatgtaaagctgacgtatacagccctcatggaaaaggcagctgccagggaa
aaggaaagactgagagaggaacagcgaaaggtgaaacgagcggaagcagctttcaggtct
atattacgaaatctgagtccacccgtagaatacgattcttcgtacgataagatccggcct
ttgattgaatcccatcccgatttcaacggtctcttgcttgaatccgaacgtgtgcgggta
tttaaagaatatacaactgccttagaggaggcgtgcagtcatcatcacggccgcagcaag
aaaagtaaaaagaacacaaagcacaaacgcaatcgttcatcgtcgcggtcttcagtaacg
tcgattagcagtagttccggtggttcatcacgaaagaagaaaaagaaaaagaaaagccga
taccaatcccgaagtccctccccatcgctcaagaaaagtcgatacttggaagcaagccct
tcaccatcgaagcgattttcccccgtagaggacgaaagtgaaagcggctataaagcttcg
gagaaatataggcattaccgtgaggccactccggaggaaggtgaagttacacacagagaa
gcagacgaggccatgctgtcagagcgagaattggaagaccgacgtagagaactccttgct
cagctgcattcgggagccaccgaagacgtatctgattaa
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