Varroa destructor (honeybee mite): 111248901
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Entry
111248901 CDS
T07383
Name
(RefSeq) cleavage stimulation factor subunit 3-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111248901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vde03019
]
111248901
Messenger RNA biogenesis [BR:
vde03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111248901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_C
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
111248901
NCBI-ProteinID:
XP_022657730
UniProt:
A0A7M7K9L6
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MSDTERLRASEKRLEENPYDIEAWSVLVRDAQARKIEDAREVYERLVSTFPNTGRYWKVY
IEHELKARCFDRVEKLFTRSLIKVLNMDLWKCYLAYVKETKASLPSYREKMAQAYDFTLD
KMGMDVSSSSVWHDYVNFLKSVDAVGSYAENQRITAVRKVYQKGVHNPMTNIEQLWKDYV
TYEQNINPLIAEKMISDRSRDYMNARRVSKEYEVHSRGINKNMPSVPPQGTPEEMRQLEL
WKKLIAWEKSNPLRSEDLALVTRRVMFAYEQCLLCLGHHADIWLQAAQFLDERSRAAADR
GDPTLGRQYAEEAATMYERAISGLLCRCQLLYFAYADFEEGRNNHKKVHDIYNRLIDIRD
SDPTLAYVQYLKFARRAEGIKSARQVFKKAREDERSNHHVYVAAALMEYNCSKDKTIAFK
IFELGLKKYGGNSDYVLAYIDYLSHQNDDSNTRVLFERVLTSGQLSAEKSLDIWNKFLEF
ESHIGDLTSILKVEKRRAAAIEKLKEFEGKETALLVDRYRFLELVPCSPAELITMGYREL
LLKNRGALAGGLVAGAILDAGEAHKEKVFRPDVLQMIPFKPKQMCPNGSHPVPGGVFPAP
PAAAELMVRLPPPTSFNGPFVAVDKLIDIFMNMNLPEKMPEPDAAQNGLTLKIFEHVLKP
VDFGQGQKRPRGGGDNSDSENEENGFPNQLSNEIFRSRQQRKVQQQQHQQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacacagagcgtttgcgcgcctccgaaaagcgccttgaggagaatccttatgat
atcgaggcttggtctgtgctggttcgagatgcccaggcacgtaaaatcgaggatgcacgt
gaggtgtacgaacggctcgtgtcgacatttcctaatacgggacgctattggaaagtctac
attgaacacgagcttaaggctcggtgttttgaccgggtcgagaagctcttcacacgaagc
ttaatcaaggtcttaaatatggacctgtggaagtgttaccttgcctacgtaaaagaaacc
aaagcttcgcttccctcgtatcgtgagaaaatggcacaggcgtatgacttcacgttagac
aagatgggtatggacgtttcatcttcttccgtttggcacgattacgtgaacttcttaaaa
agcgtggatgccgtcggcagctacgcagaaaatcagcggattactgctgtcaggaaggtg
tatcagaaaggggttcacaatcctatgacgaacatcgagcagctatggaaagattatgtc
acgtacgaacaaaacatcaatccgctgatagccgaaaagatgatttcagaccgcagcaga
gattacatgaatgctcgccgggtttctaaagaatacgaggttcattcgagaggaattaat
aaaaacatgccttcagttccaccacagggtactccggaagagatgcgccagcttgaattg
tggaagaagttgatcgcgtgggagaaatctaacccattacggtccgaagatctggctctt
gtcacacgacgagtgatgttcgcttatgaacagtgcttactctgcttgggacatcatgcc
gacatctggttgcaagctgctcaatttctcgatgaacgttctcgagctgctgcagatcgg
ggtgatcccacgttgggacgacaatacgctgaagaggcagccacaatgtatgaacgtgca
atcagcggtctattgtgtcgttgccagttgctgtactttgcatacgcggatttcgaggaa
ggtcgtaacaaccacaagaaagtccacgatatctacaatcgtctaattgacattcgcgac
tcggatccgacattggcatatgtacaatatctaaagtttgctcggcgagctgagggcatc
aagagcgctagacaagtgtttaagaaagctcgagaagatgaacggtccaaccatcatgtt
tacgtggctgcagcacttatggagtataattgcagtaaggacaaaacgattgcgttcaag
atatttgagcttgggctaaaaaaatacggtgggaattctgactatgttcttgcttacatc
gattatttatcccatcagaatgatgattcaaacacccgagtcctgtttgagcgtgtactc
acctcaggccaactctctgcggaaaagtctctggatatctggaataaattcctggagttt
gaatcccacattggtgacctaacctcaattctcaaggtagagaagcgtcgtgctgctgct
atcgagaaactcaaagaattcgaaggaaaagaaaccgctttacttgttgacaggtatcgt
tttctagaactggtgccttgctcaccggctgagctaatcacaatgggctatcgagagcta
ttgttgaaaaataggggcgcattagccggaggtttagtggcaggggcaattctcgatgct
ggagaagctcataaggagaaggtgttccgccctgatgttctccagatgataccttttaaa
cctaaacagatgtgtcccaacggctctcatcctgtcccaggaggtgtgttcccagcgcca
ccggcagccgccgaattaatggtccgccttcctcctccaacgtcattcaatgggccgttc
gtagcagttgacaaactcattgacatatttatgaacatgaatctgcctgagaaaatgccc
gaacctgacgcggcacagaatggcttgactttgaagatttttgagcacgtgcttaaaccc
gtcgattttggtcaaggccaaaaacgaccacgaggaggaggcgataactccgactcagaa
aatgaggaaaatggtttccctaatcaactatcgaatgagattttccgttcacggcaacag
cggaaggttcagcaacaacagcatcagcagtaa
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