Varroa destructor (honeybee mite): 111249107
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Entry
111249107 CDS
T07383
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111249107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vde03019
]
111249107
Messenger RNA biogenesis [BR:
vde03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111249107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
111249107
NCBI-ProteinID:
XP_022658225
UniProt:
A0A7M7JZE0
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MTKICRFLPSPTLFITEIDDYSSDDYGTSFENGCVTPETESLYTYSRERLQSVSKIWEPH
NPPVKEEDEDEMATHPHDDDVIDTSQVTEADREKFFDCLDKMRSVVGDSEPENVLCQAAK
SQNFDPERALDIIFSRRSGRDKPDVPAAIHGAFKAGVAEAVSNPNSQNNQFQSEFNIDAL
LGSASVTTQGMDIDSLLSGKLPSIAFPALPDTVTDFSHNSGPLHGSPGNLADSLGTLMDS
SLTLDDLLGTSIEPRKGLDLKQILAGNTSNQTKEQAGLNQTLATRESNNPMIVPIRTSTT
DINELSLSGKVTDALDELLQASAEQQSIERNRLAPSQETSEMSRVLLKLQRRNEGALGTT
IRWYKGLYLRQKETFAFEEPSPDDLVKNTVQRNGETFCGVKKLFFPETKPLKQHRAPLIS
VPPVEVPMRVTFSGKNFKELSSKASKFQPGKEAARELNELKIEQEINNAPKKLPPDTPKV
TSSPKPARHLKVDTKIIQEQYDKERSARKPLLNLVVIGHVDAGKSTLMGHLLYLTGNVSK
KTMDKYEHESKKFGKASFAFAWVLDETPEERSRGITMDIAHARLETGHRIVNILDAPGHK
EFIPNMITGAAQADAGILVVNATRGEFETGFESGGQTREHTMLIRSLGVSQLAVVVNKLE
TCAWSENRFNEIASALRPFFKQTGFGEQSVSYVPCSGLTGDNLHERSKNSLLTAWYKGPC
LLEVIDHMRPPARAVTRPLRMCVTDVFKGVQSGVCVAGRIESGSVAQGDKLSVMPAQENC
IVKALAIDELSQQRVFAGDNVVVTLDKCDPANIVSGSVLCDLSNLIRVVTKFEAKVVIFN
VDVPIIKGFPVILHFQATSEQAHFGRLIKELNRGTGEVIREKPRYLGKNSTGVVIIKVAR
PVCLELYQDSKELGRITLRQRGQTIAAGIVTALL
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagatttgtcgctttctaccttccccaactctgtttataacagaaattgatgac
tactcaagtgatgattatggaacgtcttttgaaaacggttgtgtaacgccagaaacggaa
agtttgtacacgtattcacgtgagagactccagtcggtgtcgaaaatctgggaaccacat
aatcctccagtcaaagaagaagatgaggacgaaatggctacacatccgcatgatgatgat
gtgatcgacacaagtcaggtgaccgaagctgatcgtgaaaagttcttcgactgcttagac
aagatgcgatctgtcgttggcgattcagaacctgaaaacgttctttgtcaggcagcaaaa
agccagaattttgatcctgagagggcactcgatatcatttttagtagaaggtcagggaga
gacaagccggatgtaccagctgctattcacggagcttttaaagctggcgtcgctgaagca
gtttccaatcccaatagtcaaaacaatcaatttcagagcgaatttaacatagatgctctt
cttggcagtgcctcagtaacgacacagggcatggatatcgactccttattaagtggcaaa
ttaccgtctatagcgtttcctgcgcttcctgatacagtcactgatttttctcataattct
gggcctttgcatgggtctccgggcaacttagctgattcacttggaacgttgatggacagt
agccttactttggacgacttactaggcacaagcatagagcctaggaaaggtctagatctc
aagcagatattggcaggaaatacttctaatcagacaaaagaacaagcaggactaaatcag
acattagcaacacgggaatcaaataatccgatgatcgttcctattagaacatcgacaact
gatataaacgaactttcactgtcggggaaagtgaccgatgcacttgatgaactacttcaa
gcgagtgcggaacaacaaagcatagaacggaaccggctggcgccctcccaagaaacctca
gaaatgtcacgtgtgctcttaaagttacagcgacgtaatgaaggagcactaggcaccacg
ataagatggtacaagggattgtatcttagacaaaaggaaacatttgctttcgaagagcca
tcacccgatgatctagttaaaaatacagtacagcgaaatggggagacattttgcggagtg
aagaaactcttttttccagaaactaaacctttaaagcaacatcgcgctccgttaattagt
gttcctccagttgaggttcctatgcgtgtgacattcagcggcaaaaatttcaaagagtta
tcgtcaaaggcctcaaaatttcaaccaggtaaggaagcagctcgagaacttaacgaactt
aaaatagaacaagagataaacaatgcgcccaagaagctcccaccagatacgccaaaagtc
acatcttctccgaagcctgcaagacatttaaaggtggacacgaagataattcaagagcag
tatgacaaggaacgaagtgccagaaaaccacttttgaatcttgttgttatcgggcatgta
gacgctggaaagagtacgttaatgggccatcttctttatctcactggaaatgtcagcaag
aaaactatggacaaatacgagcacgaatctaagaagtttggtaaggcatcatttgcattt
gcctgggttctggacgagacgcctgaggagagaagccgcggaatcacgatggacatcgct
catgctagactggagactgggcataggatcgtcaatattctggatgcaccaggacacaag
gaattcattccgaacatgattacaggtgccgcgcaggcggatgcaggaatccttgttgta
aacgccacccgtggcgagtttgagactggatttgaatctggaggtcagacgagagagcac
acaatgctgatcagatctttaggtgtatctcaactggcggttgtagtgaacaagttggaa
acttgtgcctggtcagagaatcgcttcaacgagattgcttcagctctcaggccctttttt
aagcaaacgggttttggagaacagagcgtctcatatgtgccctgtagcgggctgactgga
gataatctgcacgagcgaagtaaaaattctcttctgactgcatggtataaaggtccttgt
cttcttgaagtcatcgatcatatgaggccaccagcccgtgctgtaacgcgaccacttcgc
atgtgcgtcactgatgtttttaaaggggttcagtccggagtgtgtgttgctggaagaatc
gaaagtggatctgttgcgcaaggggataagcttagtgtcatgccggctcaagaaaattgc
attgtaaaagctcttgccattgatgagctgtctcaacaaagagtctttgcaggtgataat
gtagtcgtaacgttagataaatgtgaccctgcaaacattgtttccggctccgttctttgc
gatctaagtaatcttattcgggtggtcaccaaattcgaagctaaggtggtgatttttaac
gtggacgttcctattatcaagggctttcccgttattcttcacttccaggctacgagtgaa
caggcgcatttcggaaggcttattaaagaacttaacagaggcaccggcgaagtcatccgt
gaaaaacccaggtacttgggaaaaaacagcactggcgttgtaataatcaaagtggcgcgt
ccagtctgcctagagttatatcaagattcaaaggagctcggcagaataactctgcgtcaa
agaggccagacgatagccgctggaattgttacggcgttgttatga
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