Varroa destructor (honeybee mite): 111252017
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Entry
111252017 CDS
T07383
Name
(RefSeq) endoribonuclease Dicer-like isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
vde
Varroa destructor (honeybee mite)
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vde03036
]
111252017
Chromosome and associated proteins [BR:
vde03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111252017
microRNA pathway
RISC loading complex
111252017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
DEAD
Dicer_dimer
ResIII
Helicase_C
Dicer_dsRBD
Dicer_platform
Cas3-like_C_2
nSTAND3
Motif
Other DBs
NCBI-GeneID:
111252017
NCBI-ProteinID:
XP_022665037
UniProt:
A0A7M7MI07
LinkDB
All DBs
Position
Unknown
AA seq
1494 aa
AA seq
DB search
MSGYSSILPQPHDRADVGTYVETSYQKYFLVPVTISGNSLTAILLNRKMAEAKRYEHAAR
DYQVEILEKTLEQNVIICLGTGSGKTFISVMLIKELLYETYSCFEAGGKRSVFLAPTVSL
AKQQVNYLKKFLDAEIGVYVGLDVDLWTKAVWTVEFSAHNVLVMTPQVFLNILNFNYVQL
SSVNLLVLDECHAASGKAPYVQIMQNHYKDLEEGKRPKILGLTASVLNRKVKPTSVQKEV
RELCSRLNSKIVTSVDAISYGTKPTEIIVSYNEIPPVQIQVHVSPCDASVFCAPNGENSL
VAQIERLLREVGPFGALKSIEHRIHITKNLLENSLAESHVIGTYKTILVSLERVEASLKA
WSTNVRCGFQKNQYPVVIPPDLRNILVDPLQYSFPPKVHRLLEMFRSFERSNITLCCVVF
AQERYTVFSLWCVLSMLSRRCPNRYGYIRPGFIMGQGIMSQFSNTQSKIMNFVDERETTD
SDQHVLNDFREKRLNVLVATAVIEEGIDIPYCNLVVRFNEPINLRSYVQSRGRARSRPSV
YAVMCPRNTVHKMSVALQQLKESELNVLVLCLQDNMDIDSADMEKALRDDPDLPTLFAFP
NKPRDSAIITAQSARTILQWYCDLLSDDRFKVLKPKFQYTTIKSDAYGHKIRCNIELPRE
SKLFGQQIYGKFLENKIKAKISAALEACKRLYDVGELTENLIPKRRPPANTYEWTDEEVS
DEIKALFKNNTITQDSSITCGRAQASQLKTCPIPRLPACAKVFAFRITLHEPFVDENYHG
RIFNVGNEPLCFGILTFNTEDVGTIPDFPLFTKAGVETVRVEQIHDVFITEVQWSICSLF
HRYMVTRVLRIAGVECDPFAAPAIVPISGNKLNYTLMNMLRNSTDFTLSIDSVVTVTSEL
NERETKRSYFVGELFQEDGMLTVSLLGMPRNIDYVACHHRVKTMYKEETPDAIKRRYAKH
RNDICVELLTASQWSKGLSVASCLYRLNRLLVAENIRMNIVHAGIGKAIQEASSMRYERL
SNDSRSFRSKDNIRLDGITFILDEPIDSSGPSAIDIYTALSPRSANDIVDSERYEVIGDS
YLKLVVTLDLFGRFDSKDEGYLTQQRCRLVSNMHLVTLAVPHKIQDAVESLQFCARANFL
PPGCKTADGHQDMIVQKYKSKICADSVEALIGVYLEKSGANGALNFLNYLGLKLDCRTSG
SFVSRFNLSSWTEPEAELVSRYLPRFKRQLYEVQTILDYQFSKPLLLLEAITHQSYTRNC
LTRSYERLEFLGDAVVDYLVSRYLYYNCPQLSPGELSNSRAALVCNTTLARAVTNHQLHK
HLLHQSPVLLRLTECYLAALEKGVLDEVLICEDDSDDVSAVDVPKPLGDLFESLIGAVFL
DTAMNFERTWIVFRRLIGDDVIRNYLTDIPRHPVTMLMEMYPNMVTYGKIEILENKRVRL
EMSVMNERFTVTARNKKVARITLAKKALRHFDQVKQCGKDFLGAMERIAKELQL
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttactcctccattctaccacagccacacgacagggcggacgttggtacatac
gtagaaacaagttaccaaaagtattttctggtgcctgttactatctccggcaacagtttg
acagcaatattattgaacagaaaaatggccgaagctaaaaggtacgagcacgcagcccgc
gactaccaagtagagattcttgagaagacgcttgagcagaatgttatcatctgccttggc
accggctccgggaagacctttatatcggtaatgcttatcaaggagcttctatatgaaaca
tactcatgctttgaggcaggggggaaacgaagcgtctttcttgcaccaaccgtatcattg
gcgaagcaacaagtaaactacttgaagaaatttctagacgccgaaattggcgtatacgtt
ggattagatgtagacctatggacaaaagccgtatggacagttgaattttcggctcacaat
gtgctcgtaatgactccgcaggtgtttcttaacattctcaacttcaactatgtccaactc
tccagcgtcaacctgctggtcctagatgagtgtcacgccgcaagtggcaaggctccctat
gtccagatcatgcagaaccattataaggaccttgaagagggaaagcggcctaaaatactt
ggcttgacggcatcagtgcttaatcgcaaggtcaaaccaactagcgtccagaaggaagtg
cgcgaactctgctctcgtcttaactcaaaaatagtcacttcagtcgatgcgatcagttac
ggtacaaagccaactgagatcatcgtaagctacaacgaaattccacctgtgcaaatccag
gtccatgtatctccttgtgatgctagcgttttttgtgcgcctaacggcgagaactccttg
gtagcacaaatcgagcgtttactcagagaagttggaccgtttggtgctttaaagtctata
gagcatcgaattcatattactaaaaatttactcgaaaattcattagctgagtcacacgta
atcggcacatacaaaactattttagtgagtcttgagcgcgtagaagctagtttgaaagcg
tggtcaacaaacgtacgatgcggctttcagaagaatcaatacccagtggtgattcctccc
gatctgcgaaatatactcgttgatccattacagtattcgttcccaccaaaggtgcatcgg
cttcttgaaatgttccgttcatttgaaaggagtaacataacgctatgttgtgttgtcttt
gcccaagagcgttacacagtgttcagcctgtggtgtgtgttatcaatgctaagtcgacgc
tgcccgaaccggtatggatacattcgcccaggatttatcatgggccagggaattatgtca
caattcagcaatacccagtcgaagatcatgaacttcgttgatgaacgcgaaacaactgat
agcgaccagcacgttcttaatgattttcgagaaaaacgacttaatgttcttgttgccacg
gcggttattgaagaagggatcgatatcccttattgtaaccttgtcgtccgtttcaatgag
ccaataaatctgcgaagctacgttcagagccgagggagggcacgaagtaggccgtcagtt
tatgccgtcatgtgtccaaggaatacggtccacaagatgtcagtagctctacagcaatta
aaggagtctgaacttaacgtattggtgctttgcctgcaagataatatggatattgatagt
gccgacatggaaaaggcacttcgcgatgacccggacctgccaacattgttcgcctttcca
aacaagccacgtgattcagcgatcatcaccgcgcagtcggcacgtactatcttgcaatgg
tactgtgatctgttaagcgatgaccgtttcaaagttttaaaacctaaatttcaatatacg
accatcaaaagtgatgcttatggccacaaaatacggtgcaacatcgaactccccagagag
tctaaactttttggccaacaaatatatggaaagtttctcgaaaataagataaaggcgaaa
atttctgccgcgttagaagcgtgcaagcgactgtatgatgtcggtgaactcacagaaaac
cttataccgaaaaggagacctccggctaacacgtacgagtggaccgacgaagaggtctca
gatgaaatcaaagctcttttcaagaacaatacgatcacacaagactcttcaatcacctgt
ggcagagcccaagccagtcagttgaagacttgcccaattccaagacttccggcttgtgct
aaagtgtttgcctttcgcatcactcttcatgagccattcgtcgatgagaattatcatgga
agaatattcaatgtgggaaatgagccgttatgttttggtattctcacatttaacactgag
gatgtgggaacaatccctgatttccctttgtttactaaagcaggcgtggaaacagtgcgc
gttgaacagattcacgacgtattcatcacagaggtacagtggagtatatgcagcttattt
catcgatacatggtgacgcgtgttctccgcattgctggggttgagtgcgatccatttgcc
gcccctgctatcgttccaatttctggtaacaagttgaattatacattgatgaatatgcta
aggaactccacggattttactttaagtatcgattctgtagttaccgttaccagtgagcta
aatgaacgagaaacaaaaagatcctacttcgtgggggaactttttcaagaagatggcatg
ttaacagtatctctgctgggtatgcctagaaatattgattacgtcgcatgtcaccataga
gttaaaacgatgtacaaagaggaaacacccgatgcgattaagcgaagatacgccaaacac
aggaatgatatttgtgttgaactgctgactgcttcacagtggtccaagggactttctgta
gcatcatgtctgtatcggctcaaccgactattagttgctgaaaatatccgaatgaacatt
gtacatgccggaattgggaaggcgattcaggaagcaagttctatgagatacgaacgactt
tcaaacgattcacgatcgtttcgatcaaaagacaatatcagattggatggtatcaccttt
attcttgatgagcctattgattcttcgggaccttctgctatcgacatctatacagcgctt
tcgccacggtcggcaaatgatattgttgactccgaacggtatgaggtaattggagactcg
tatcttaaacttgtggtcaccctagaccttttcggcaggtttgattcaaaagatgaagga
tatttgactcaacaacgatgccgcctcgtgtctaacatgcatctcgtgacccttgccgta
ccacacaaaattcaagatgcagtggaaagcctgcagttctgtgccagagcgaacttcttg
ccgccgggatgtaaaacagctgacggtcatcaggatatgatcgtacagaaatacaagagc
aagatttgcgcagattccgtcgaagcgttaataggtgtgtatcttgaaaagtctggagct
aacggagcactaaattttctgaactatttaggtctgaagttagattgtagaacatctggc
tcgttcgtctcgaggtttaatcttagctcttggaccgaacctgaagctgagcttgtatct
cgttatttgccgaggttcaaacgccaattgtacgaagtgcaaacaattttagactatcaa
ttttcgaagccattactgctattggaagctatcacccaccaatcctatacacgcaattgt
ttgacgcggtcctatgagcgactcgaatttctaggcgacgccgtcgtcgattatttggtg
tcacgttatctatactataattgccctcagcttagcccaggcgagttgagcaactcccgt
gcagccctcgtttgcaacactacgttagctcgcgccgtcacgaatcaccagctgcataag
cacttgctccatcagtcgcctgtacttctcaggctgactgaatgctatttggcggcgttg
gagaagggcgttttggacgaggtactcatttgtgaagatgattcggacgacgttagcgct
gtcgatgtgccaaaacctcttggagatctgtttgaaagcctaataggcgcagtttttctc
gacactgctatgaattttgagcggacatggattgtgtttaggagactaataggggatgac
gttattcgaaattatttaactgatataccgcggcatcctgtaactatgctcatggaaatg
taccctaatatggtcacatatggcaaaatcgaaattcttgaaaacaaacgagttcgtctt
gagatgagtgtcatgaatgaacgtttcaccgtaactgcacgcaacaagaaagttgcccga
attacactagctaagaaagcgctgcgccacttcgatcaagtgaaacagtgcggaaaagat
tttcttggggctatggagagaatcgcgaaggaactacaactctga
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