Varroa destructor (honeybee mite): 111252370
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Entry
111252370 CDS
T07383
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
vde
Varroa destructor (honeybee mite)
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vde03021
]
111252370
03036 Chromosome and associated proteins [BR:
vde03036
]
111252370
Transcription machinery [BR:
vde03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111252370
Chromosome and associated proteins [BR:
vde03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111252370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
S1
HHH_3
SH2
HHH_9
Spt6_S1
Tex_YqgF
S1_RRP5
Tex_N
Motif
Other DBs
NCBI-GeneID:
111252370
NCBI-ProteinID:
XP_022665857
UniProt:
A0A7M7KF66
LinkDB
All DBs
Position
Unknown
AA seq
1765 aa
AA seq
DB search
MSDFIESEAEESSEEEQTDETRLHKKKGRPAAQIDSDEEEDGDEEKLAEEMKDLINDDEE
EEEGSSGSSSGSSSSGESGEESGREDVGEGGHKEKKHKRKHDYDDDNIDDDDFDLIEENL
GIKVQRKKKLKRVKVLDEDEEEEGDKEKDKDELAQELFEDGDEDMDETASRADRDSSRHP
EDIHRSQDEDLGTESGSDDDVNDFIVDDDGQPITKTKKKRHVKYSDSALQEAQDIFGVEF
DYEDVRGYDDEFEGSEEDEEYEDEEEQEPGARPAKASKAAGKKAAAKKSIFEVFEPIELE
QGHFTDRDQEIRTTDEPERFQLRGVPVTQADETELAEEAEWIFRQCFLKPTISIQKPPLG
SDSSDSGDRSSSGHQPLGGKKSRTAVNKICETLKFMRNQHFEVPFIAFYRKEYVQPELTI
NDLWLIYKWDERWCHLRQQKLNMEKLFKKMQEYICEQILNDDSAADNLRQIEETDFERLR
EVQSSEELKDVYLHFLLYYAQDLPAMQEAAMLKQKQKREEVRRKRLEKQKEKAARQAEGG
DGADEESADDELEDEDDGEKEELFLKRAKQKDCFAVCRELGLHGLAKKFGLTPQQFGENL
RDNYQRHEVVQFPVQPLEAAAEYVNDRLNTPAECLKAARYMVACEIARDPTVRRCVRETF
FERAKLSVTPTKTGIKEIDESHPCYAFKYLKNKPVRSLQGDQFLKLKMAEDDKLIKIFVR
MDGEGASDSGSYAHDVRQLYHRDEFSKNVQEWNGQREEALNYALNRLLYPTLEKELKLRL
LREAFDHVLRACANKLYNWLKIAPYEPPEEVQEEEDFDTRDGVKILAIAYQNDWNIPAFG
ALISGEGEVTDYIRLENLLKRRNARRETEREGKQRDMEKLKRFLADKKPHCVVISAESRE
ALSVKEDVEQAIRELSEEEQFPPLQVMLLDNELAMVYATSKRAEQDFAQYPPLLKQAVSL
ARRMQDPLIEFSQLCGHDEEILCLKYHPLQDNVPKEEFEWVLAMELINRTNEVGVDINRC
VEQSHTSGLLQFVSGLGPRKAYAIIKNLKQTHSKLEGRSNLVTSLKLGPKVFLNCAGFIR
IDTNSFESSSSAYVEVLDGSRVHPEMYEWARKMATDALDYDDNDEANLNPAEALEEILDN
PDKLKDLDLDAFAIELERQGYGNKSITLYDIRAELNHRYKDLRVDYAPPEKEVLFNLLTK
ETPETFYLGKLVTCQVSGIARKRPQGDQLDQANPIRNDESGLWQCPFCLKNDFPELSEVW
NHFDAGNCPGPAMGVKVRFDNGITGFIPTKNLSDKRVANPEERVRVGQIIHGRVTKIDIA
RFAVELTTKSSDLADKNGEMKPPKDLYYDHDADDKERRKADDAQKHKQRQVYVKRVIVHP
SFHNISYQEAVKLLKTMDQGEIVIRPSSKGVDHLTVTWKVHGDILQHIDVQEKGKENSFS
LGSSLIINGEEFECLDEIIARHVQPMAGFAKDIASFKYFFDFEGGKKEQAEKWLQEEKRK
APAKIPYCISACANLPGKFLLSYQPSTKPRHEMVTVTPDGFRYRSQVFHSLNALFRWFKE
HFRDPIPLGGSSASAVTPGAASTHPYMTPGMATPGRMSAVPMVMATPGMATPGARTPASI
ATASYAAAYNAAGAGYGATTAGFGGMTPQPMQISTTPGYVTPGQSYAGNYGGSMPPPTTP
SSSYHRNPQSSSRSHHGSPSPSPRPSPRSHQSSGSTRSGGGSSSRDQHGSSSSLAGAGRS
AEDWKKMAVDWASGKSRNQGGARRD
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacttcatcgaaagtgaagcagaagaaagctccgaggaggagcagaccgatgaa
actcgtcttcataagaaaaaagggcggccggctgctcaaatcgactcggacgaagaagaa
gatggagatgaggagaagttagccgaagaaatgaaagaccttatcaatgacgatgaggaa
gaagaggaaggctcatcaggatcttcgtcaggttcatcgtcgtcgggtgaatctggcgaa
gaaagcggacgtgaagacgtaggagaaggcggccacaaggaaaagaagcataagagaaag
catgattatgatgacgataacatcgacgacgatgatttcgacctcatcgaagaaaatctt
ggtataaaagttcagcgcaagaagaagctcaaacgtgttaaggtgctcgatgaagatgaa
gaagaagagggcgataaagaaaaagataaagatgaacttgctcaggaattatttgaggac
ggtgatgaagatatggatgaaaccgcttcgagagctgacagagattcatctcgacatcct
gaagatattcacagatcacaggatgaggacctcggcaccgaatcgggatcagatgatgat
gtaaatgattttattgtcgatgacgatggccaacccataacgaagaccaaaaagaaacgt
cacgtcaaatattcagacagtgctttacaggaagcgcaggacatcttcggggttgagttt
gactatgaggatgttcgtggatatgatgatgaattcgagggttctgaggaggatgaagaa
tacgaagatgaggaggagcaggaacctggcgctaggccagctaaggcctccaaagctgct
ggtaaaaaggctgctgcaaagaagtctatctttgaagtatttgaaccgattgaactggaa
cagggtcacttcaccgatcgagatcaggaaattcgtacaactgatgaaccggagcgtttt
cagttgcgtggagtacctgtcactcaagctgacgaaacggaacttgcggaagaggcagag
tggatctttcgtcagtgttttcttaagcccacgatttctatacaaaagccgccgctgggc
tcggactcgtccgatagcggtgatcgctcatcgagtggtcaccagccactgggaggtaaa
aagagccgtacagccgtcaataaaatctgcgagacactcaagtttatgcgcaaccagcat
ttcgaagttccatttatcgctttttatcgaaaagagtacgtccaaccagaactaacaatt
aatgacctgtggctaatctacaagtgggatgagcgctggtgtcatctccgtcaacaaaaa
ctaaacatggaaaagctgtttaagaaaatgcaggaatatatctgtgagcagattctaaac
gacgactctgccgctgataatttgcgacaaattgaggagactgacttcgaacgactccgt
gaggtgcagtcttcggaagaattgaaggatgtgtaccttcattttctcctctactatgcc
caggatttgcccgcaatgcaagaagctgcgatgcttaagcagaaacaaaagcgggaagaa
gtccgtcggaaacggctcgaaaaacagaaagagaaagcggctcgccaggccgaaggaggt
gacggcgccgatgaagaaagtgccgatgacgaacttgaggacgaggacgacggtgaaaaa
gaagaactatttttaaaaagagcaaaacaaaaggactgctttgctgtttgccgagagcta
ggtttgcatgggctcgccaagaagtttggtcttactccacaacaatttggtgaaaacctt
cgcgacaattatcagcgtcatgaggtggtccaatttcctgtgcaacccctagaggcagct
gcagagtatgtaaatgatcgtttaaatacacccgctgaatgtcttaaagccgcaaggtat
atggtggcctgcgaaatcgcccgtgatcctacggtccgtcgttgtgtacgggaaactttc
ttcgaacgagccaaactgagtgtcacaccaacaaagacgggaattaaagagattgacgaa
tcgcatccctgttacgcctttaaatatttaaagaacaagcctgtccgttctctacaggga
gatcagttcctaaaattgaagatggctgaagatgacaagctaatcaagatctttgtccgt
atggatggtgaaggcgcatcggattcaggctcgtatgcccatgacgtgcgtcagctttac
catcgtgacgaattctcgaaaaatgtccaagaatggaatggacaacgagaagaagctcta
aattatgcccttaatagattgctgtatccgacactggaaaaagaacttaagttgcgacta
ctgcgagaagcattcgatcacgttttaagggcgtgtgcgaacaagctttataactggctc
aaaatcgcaccatatgaacctcccgaagaagttcaggaggaggaggatttcgatacacgt
gatggcgtgaagatactggccatcgcctaccagaacgactggaacatcccggcattcgga
gccctaattagcggcgaaggagaagtaactgattacattcgattagagaatcttctcaag
agacggaacgctcgtcgtgagactgaacgtgagggaaaacaacgagatatggaaaaactg
aaacgattccttgcagataagaagcctcactgcgtggtaatctctgcagaaagtcgagaa
gcgctgagcgtcaaggaagacgtggaacaggccatccgggagctttctgaagaagaacaa
tttccgccgctgcaggtgatgcttttagataacgagttagctatggtttacgccacctca
aagcgagccgaacaagattttgcgcaatatccacctttgctaaaacaggccgtatcactc
gctcgtcgtatgcaggatcctctcattgagttctctcaattgtgcggccatgacgaagaa
atattgtgtttgaaatatcaccctcttcaggacaatgtgccaaaagaagaatttgaatgg
gttttagctatggagcttattaatagaacaaatgaggtcggtgtagacattaatcgatgc
gttgagcagagccatacatcgggactactgcagtttgtgtctggccttggaccgcgtaag
gcgtatgctattatcaagaacttaaaacaaacgcattcgaaactcgagggccgctcaaat
ctcgtaactagcttgaaacttggccctaaagtgtttctcaattgcgctgggtttatccgt
atcgacacaaactcattcgagagtagttcgagtgcttacgtcgaggtgctagatggctcg
cgagttcatcccgaaatgtatgagtgggcacgcaaaatggcgacggacgccctcgattat
gacgacaatgatgaggcgaacctcaatcccgccgaggcgctagaagagatcctcgataat
cctgataaactcaaagatcttgatctcgacgcatttgctatcgaacttgaacggcagggc
tatggcaacaagagtattacattatacgacattcgggctgagctaaatcatcgttataaa
gatctccgtgtcgactatgcgccgcccgagaaggaggttttgtttaatttgctaactaaa
gagacaccggagaccttctacctgggcaagctggttacgtgtcaggtatctggtattgct
cgcaaaaggcctcaaggggaccagttggatcaggctaatcccatccgtaacgacgagtct
ggactatggcaatgtcccttctgtctcaaaaatgatttcccggagctctccgaagtgtgg
aaccacttcgatgcgggtaattgtccaggaccggccatgggtgtcaaggtccgtttcgac
aacggtattacgggcttcatcccaacgaaaaacctgtcagataaacgcgtcgctaatccg
gaagagcgcgttcgtgttggacaaatcatccatggacgtgtgacgaaaatcgatatcgca
cgatttgctgttgaactgacaaccaagagttctgatctcgctgataaaaacggtgagatg
aaaccaccaaaggatttatattatgaccatgacgcagatgataaagagcgtcgcaaggcg
gatgatgcacaaaaacataaacagagacaagtttatgtcaaacgtgtgatcgtccatcct
tcatttcataatattagttaccaagaagcagtcaaattgttaaagaccatggaccagggc
gaaatcgtcattagaccatcctcgaaaggcgtggatcacttgaccgtaacgtggaaagtt
cacggagacattttgcagcatatcgatgtgcaggagaaaggaaaggaaaatagtttttcg
cttgggtcatcgttaattataaacggcgaggaatttgaatgcctcgacgaaatcatagct
cgtcatgttcagccaatggctgggttcgcaaaggacattgcttcttttaagtatttcttc
gatttcgagggcggtaaaaaggaacaagccgaaaaatggctacaagaagaaaaacgaaaa
gcacctgcgaaaattccttattgtatttccgcctgcgccaatttaccaggcaagtttcta
ctttcatatcaaccaagcacaaagccccggcacgaaatggtgacagtcacaccggatggt
tttcgttatcgaagccaggtgttccattcgttaaacgctctgttccgatggtttaaggaa
cattttcgggacccgatcccgcttggagggtcgtcagcatcggcagttactcccggcgcc
gcaagcacccacccatatatgacaccagggatggcgacgcccggtcgaatgagcgccgta
ccaatggtaatggctactccaggtatggccacacctggagcccgaaccccagcttctatt
gcgacagcgtcctatgccgctgcttataacgctgctggcgcaggttatggagcaacgact
gccggcttcgggggtatgactccccagccaatgcagatctcgacgacacccggctacgtg
acacctgggcaaagttacgccggaaactacggcggatcaatgcccccaccgacaacgccc
agttcgtcgtatcatcgaaatcctcagtcatcgtcacgatcgcatcacggatcgccctca
ccaagtccgcgaccatctccgcgttcacaccagtctagcggatccacgcgttccggtgga
ggcagtagtagcagggatcagcacgggagcagctcgtccttagctggcgcaggacgctct
gctgaagactggaaaaaaatggctgtcgattgggctagcggcaaatcgagaaaccagggc
ggagctcgacgagattaa
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