Varroa destructor (honeybee mite): 111252937
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Entry
111252937 CDS
T07383
Name
(RefSeq) ubiquitin conjugation factor E4 B-like isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde04120
Ubiquitin mediated proteolysis
vde04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111252937
04120 Ubiquitin mediated proteolysis
111252937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vde04121
]
111252937
Enzymes [BR:
vde01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111252937
Ubiquitin system [BR:
vde04121
]
Ubiquitin ligases (E3)
U-box type E3
111252937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
111252937
NCBI-ProteinID:
XP_022667344
UniProt:
A0A7M7KIH3
LinkDB
All DBs
Position
Unknown
AA seq
1283 aa
AA seq
DB search
MGDQLTAEELRKKRLARLATPPVEATPAVTGGAAPIVTAPVSPAVPTASPHGPPGSTITT
TPSTSSVHGSKKDIDDLSTVVSAATARKSSEDATGMELDESTNHSVSHSHAGAHHAGSKK
GGPAGLPVESCKRQKSLQGTELTRVPGVHAYDPSTAPPPKRSTPDSDAEAMEVDEPSFDR
STTATTIPSATAGAVVQAQHARAFVACTSIVSTTQTSSTTTTTTTTMNRMEPTIGGTIGS
ADVAAKISLTESDPNFTRMQDTIRKILLPEKANPVLLEVGASINRSTDFTGVAHIVVAKC
IAMYREAENEVSRPKASGPTSAFTSGAASLPVPAESDNPVSYLAGCYERTFVLEKELLRR
SEGCPIQEVLTEIRVQCLAYSRLLLSGAITCRWLEAKSRSECSAPDGRGSSSLHELHEEF
FNSMLQEKFPPNFVVDLILGCSHEEFASIFNPVIKMLYIGMGGASYAHQGYREYLKLLRE
LCTVKYASSNVRPFCDLLVSNEAFLPLEVLDSPYAGLEVMHRSLLGPFLSLSLFAQDNPE
VVSAFFGGDHSISPNGVSLVGRSNQTEASVLQDMMHLSRQLLCDIVHAILVNPSSRAIML
SWLVSVVKANDKRSQLRPDDMVVATDGFMINLMVVMQQLSLKVRADKVDPYYLFHPTSQL
GEHQYSVSKDTCLRMTEQELIEFRAELKANPSWQQKETKFTTECMFLSVYVHHLSIVPCV
QRYVRRLRYIRELQRAVTELEGTESLWKVIPHLNNQNSRSLAKWRSQLKKLHISKQSADV
VLFDRSLVLRCLDFYDNLAQLLLHILGTPVTQTSSSSMIPPVSKLFSAMPAWFIEDIADF
ILFVIQHKPRYVSELNSAALVHLLVLLVCAPHYVSNPYLTAKLIEVMFLLSPGVQKFTEK
LYLQIRTNPIAEQHLIVSLMKFYADIETTGASSEFYDKFTIRYHTSIVFKLLWENQNHRH
QVIEESSNGKQFVKFINMLMNDTTFLLDESLQSLKRIHELQEAMKDQAAWTSQPREVQQS
RAAQLATDERQCRSYLTLARESVDMLHYLSQDIKEPFTRPELADRLAAMLNFNLQQLCGP
KCKNLKVKNGDKYGWEPRRLLNQLVDIYLHLDCDKFEQAIANDERSYRPELFEDAVSRIN
KAMLKSDSQIKQFQDLAARVHRVLKERREIDFSDAPEEFRDPLMDTLMEDPVLLPSGHTI
DRATIVRHLLNSATDPFNRQPLQEDMLTSATDLKAKIMEWKAQKYQAARSSASASHKIGC
ETCPMEKKSNNDGTGAGPSSGQS
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatcagctgactgctgaagagttgaggaagaaacgcctggctcggctagcaacg
cctccagtagaggctacgcctgcagtcactggtggcgctgctccaatagtgaccgcccct
gtgagtccagctgttcctacggcatccccccatggaccccctggttccacaataaccacg
acaccgtccacttccagtgtgcatggaagcaaaaaggatatagatgatttatcgactgtt
gtttcagcagcaacagctcgcaaatcttcagaagatgcgactggcatggagttggacgag
tctacgaaccacagcgtaagtcatagccatgcgggcgctcatcatgccggatcgaagaaa
ggcggaccggctggcctaccagtcgaatcctgtaaaagacagaagtcattacagggcacg
gagctaaccagagttcccggagtacacgcgtacgacccaagtactgcacctcctccgaag
cggtcgacacctgacagcgacgctgaagcgatggaggtagatgaaccgagcttcgataga
agcacaactgcaacaacgataccctcagcaacggccggtgcagttgtccaagcacaacat
gcacgtgcgttcgttgcgtgcacgtcgatagtcagcacaacccaaacgagttcgacgacg
acgacaacgacgacaacaatgaaccggatggaacccacaataggagggacgatagggagc
gcagatgtcgcagcaaaaatttcgttgaccgaaagtgacccaaacttcaccagaatgcag
gacactattcgcaaaatcctactccctgaaaaagctaatccagtcttgcttgaagttggt
gcaagcataaaccgtagtacagatttcacaggcgtcgctcacattgttgtagctaaatgt
attgccatgtacagagaagcagaaaatgaggtgtcaagacccaaagcttctgggcctacg
agcgccttcacatctggagcagcctcattgcctgtccctgctgaatccgacaatccagtt
agctatctggcaggctgctacgagagaacttttgtcctggagaaggagctccttcgacga
agtgagggatgtcccatacaagaggtgctgacagaaataagagtccagtgtctagcatac
agccgattacttttgtctggagcgattacctgccggtggttagaggctaaaagtcgatca
gagtgctcggcccctgatggccgcggctcttcgagtttacatgagctgcacgaagagttc
ttcaactcaatgctccaagagaaattcccgccgaattttgtcgtcgatctcatattgggc
tgcagtcatgaggaatttgctagtattttcaatccggtaatcaaaatgttatacattggt
atgggaggtgcttcctacgcacatcagggctatcgcgagtacctgaagcttttacgggaa
ctttgcactgtgaagtacgcttcgagcaacgttcggccgttttgcgatttactggtttct
aacgaagccttcctaccactcgaagttctagatagcccatacgcaggccttgaggtaatg
catcgatcactgcttgggccgttcctttcactgagcttatttgctcaggacaacccggag
gttgtttcggctttcttcggtggagatcactcgatatcgcccaatggtgtatcgctagtt
gggcgtagtaatcaaacagaggccagcgtgttacaagatatgatgcacctcagcaggcag
ttactctgcgatattgttcacgctattctagtgaacccatcatcacgggcgattatgctt
tcatggctagtatccgtcgtgaaagcgaatgataaacgatctcaattacgccctgatgat
atggtcgtggcgacagatggcttcatgatcaatcttatggtcgtaatgcaacaattaagc
ctcaaagtccgcgctgataaggtggacccgtactatttgttccacccgaccagtcagctg
ggcgagcaccagtatagcgtcagcaaggacacgtgccttcgaatgacagaacaggagttg
attgaatttcgggccgagcttaaggctaatccgtcgtggcaacaaaaggagacgaagttc
acaactgaatgtatgtttcttagcgtttacgtccaccatctctccatcgttccgtgtgtt
caacgatacgtacgacggttacgctatattcgtgagctgcaacgtgctgtcactgagttg
gaaggaaccgaaagcctatggaaagttatccctcacctaaacaatcaaaacagtcggagc
ttagcaaaatggcgcagtcaacttaagaaactgcacatcagtaaacagtcagctgatgtg
gtcctctttgaccggtcgttggtactacgttgtctcgacttctacgacaatctcgctcag
cttcttctgcatatactaggcacgcccgttacgcaaacaagcagtagcagtatgataccg
cctgtgtcaaagctgttctccgcgatgcccgcctggtttatcgaagacattgccgacttc
attctgtttgtcatccagcataagcctcgatacgtcagcgaattgaattcggcggctttg
gtacaccttctcgtgttgcttgtatgcgccccacactatgtttcgaacccttatctgaca
gcgaaacttatcgaagttatgttcctgctgtcgccaggcgttcagaagttcaccgaaaag
ctctacctgcagattcggacaaatccgattgcggaacagcatctgatcgtgtctctaatg
aaattttatgccgatatcgaaacgacgggcgcatcgagcgagttctatgataagtttacg
attcgctaccacacttccatcgtgttcaagttgttatgggaaaaccagaatcatcgacac
caggtgatcgaggaatcatcaaacgggaaacaatttgtcaaatttattaacatgctcatg
aacgacacgacgtttctacttgacgaaagcctacagtcattgaaaagaattcacgagctg
caggaagcgatgaaggatcaggcagcgtggacttcccagccacgtgaagttcaacagtca
cgggccgcgcaacttgccacggatgaacggcagtgtcgatcctatctgactttggcgcga
gagagcgtcgacatgctgcattatctcagccaggacatcaaggagccgttcacaaggccc
gagcttgctgaccgtttggcagcaatgctcaacttcaatttgcaacagctgtgcgggcct
aagtgtaagaatctcaaggttaaaaatggcgataaatatggctgggaaccgcgccgacta
ctaaatcagttggttgatatctacctgcatcttgactgtgataagttcgagcaggccatc
gctaacgatgaacgctcatacaggcctgaacttttcgaagatgcagtgtcaagaatcaac
aaggcgatgcttaagagtgatagtcaaatcaagcagttccaggacctagcggctcgcgtc
caccgggtgctcaaggaacgacgtgagatagacttctccgacgctcccgaagagttccgc
gacccgctcatggacacacttatggaggatcctgtattgttgccgtctggccacaccatc
gatcgagccaccatcgtgcgacacctacttaactctgctacggaccccttcaaccggcaa
cctcttcaggaggacatgcttacctcagctacggatctcaaggcaaagatcatggagtgg
aaagcacaaaaatatcaagcagcaagaagcagcgcgagtgcatctcacaaaataggctgt
gaaacttgtccaatggagaagaaatcgaataatgacggaacaggagccgggccctcaagt
gggcaatcttag
DBGET
integrated database retrieval system
