Varroa destructor (honeybee mite): 111253988
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Entry
111253988 CDS
T07383
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111253988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vde03021
]
111253988
03036 Chromosome and associated proteins [BR:
vde03036
]
111253988
Transcription machinery [BR:
vde03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111253988
Coactivators
SAGA/TFTC/STAGA complex
111253988
Chromosome and associated proteins [BR:
vde03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111253988
STAGA complex
111253988
TFTC complex
111253988
SAGA complex
111253988
SLIK complex
111253988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
TFIID_NTD2
Beta-prop_EML
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_VPS8
WD40_RFWD3
Tricorn_2nd
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_DCAF12
DUF7165
Beta-prop_WDR35_TULP_N
WD_LRWD1
WD40_like
Motif
Other DBs
NCBI-GeneID:
111253988
NCBI-ProteinID:
XP_022670089
UniProt:
A0A7M7MJ78
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MASVSTSSMVPSERVTEELSAYLERRGFEASAANRPRPLPLGEFVHQRAVDCERGTGQPV
KLGAPLIAPCRVEEEFLDLKNFISEAVEPFRSELSHCLWPVFVNAIIDLLSAEQRHLLLR
FEAMFGGLFAGVDLYSGLVEDLQGISNSQELHQGTVLKEFRENKALVKLSADSWRYLQRF
LRQSEYISHLFNVHIDISIQLDSISQHRLRPVGLEPGPSDPPEPHLFQSRHMLAQRRHQH
LASLHSRTMKSHSRASNRQNDRQSGSGAGRHKSPSAKRSRINGMTSSTSSTSGQMEDAHV
RTAIAASNGAGAISPEPPAASALSLLRQSIDKVRAEPYAPNVLLIDVDASALSCSVASLA
LSDETFAVGLDNGTITLERRGPQLNPDDDSDQEEKHLRGIGSYSHLGRSWRERRRGFHSS
VVRLHPSALRTLTRSGRPPESGDGLSGGDNDCFVDNRRRTRLLGHCGTVCALAYASPALL
LSASSDTSVRAWDAVTGRNMAVYTGHQYPAWCLATSPEGLYFATGSQDATARLWTPSRTD
ALRVMAGHLGQVDTLAFHPNANYLATAASDRSIRLWAVQSGSVVRLFPSSHRGQAHSLAF
SPNGHWLAAAGEDRAVRLWDLRTCRLLADMHGHHDAVTSVVFSKDGSLLLSSSLDGSIRM
WDVHTLSSTSGSCSSSNINNCNTGNPSNTSVPSNSNSISSSSAGNAESTPVSNGGLVCCL
RFQPRVSDSMPRLGCVHGGLRKLELHHRLNVVTAIRVYGN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgtttcgacgtcttcaatggtgccatctgaacgagtgacagaagagttgtct
gcatatctcgaacggcggggttttgaggccagcgctgctaaccgaccccggcctttacca
ctaggggaatttgtgcaccagcgcgcggtcgactgcgaacgtgggacagggcaaccggta
aaactgggggcgcccctgatagcgccttgtcgagtggaggaggagttcctcgacttgaag
aacttcatctccgaggccgttgaaccgtttcgttctgagctcagtcactgtctgtggcca
gtttttgtcaatgctataattgatttactgtcagcggagcagcgtcacctgctgcttcgt
ttcgaggcaatgtttggcggactcttcgcgggtgtcgacttgtatagtggtcttgtcgaa
gatctccaaggcatttcaaactcccaggagttacatcagggtacggtacttaaagaattc
cgtgaaaataaagcgcttgttaaattgtcagctgacagctggcgatacctgcaacgtttc
ctccgtcaaagcgagtacatttcacatttgttcaacgtacacatagatattagtatacaa
ctcgattctatatcacagcaccgacttcgacctgttgggctcgaaccgggaccttcggat
ccacctgaaccccatctgttccagtcaagacatatgcttgcccaacggcgtcaccaacat
ctcgccagcctgcatagccgaaccatgaaatcgcactctagggcgtcaaataggcaaaat
gaccgccagtcaggatcgggagcggggcgacacaaatcgccgtcagcgaaaagatctcgc
attaatggtatgacgtcgtctacttcaagtaccagtggccaaatggaggatgctcatgta
agaacagccatagcagcatccaatggagctggtgccatttcacctgaaccccccgctgca
tcggcactgagcctcctacggcaatcaatagataaggtacgagccgagccttatgcccct
aatgttcttctaattgatgttgacgcatcagctctgagttgttcggtagcgtcactagca
ttatcagatgaaacattcgccgtcggtctcgataacggaacaatcactctcgaacggaga
ggacctcagttaaatccggatgatgacagtgatcaagaagaaaagcacttacggggaatt
gggtcatattcacaccttggaagatcatggagagaaaggcgacgaggattccactcaagc
gttgtacgacttcatccctctgcccttcggactttaacaaggtccggacggcctccagag
agcggcgacggattgagcggaggtgataatgactgcttcgtcgacaatcggagaaggaca
aggcttttgggacattgcggtacagtgtgcgcactagcatacgcctctcctgcattacta
ctctcggcttcatcagacacttcggttcgggcttgggatgcagtaacaggacgcaatatg
gccgtatacaccggccaccagtaccctgcttggtgtctagcgactagcccagaagggttg
tactttgctacaggatcccaggatgcaacagcgcgcttgtggacgccaagtcgaacagat
gcattacgcgtgatggctggtcatctaggacaggttgacacgctggcgtttcatccaaat
gctaattatctagcaacagcggcttcagatagatcgattcgtttatgggccgtccagtct
ggtagtgtcgtacgtctctttccatctagccatcgaggccaggcccattcgcttgctttt
tcaccgaatggacactggttggcagcagcgggtgaggaccgagctgtccgtttatgggac
cttcgcacatgccgcttattggccgacatgcatggacaccacgatgccgtaacatcagtc
gttttctctaaggacggctcgttactgctcagctccagtctggacggctctatacgaatg
tgggacgtgcacactttatcgagcacaagcggtagctgcagcagtagcaatatcaataac
tgtaacaccggtaaccctagcaatacttcggtaccttctaatagtaattctatatcctcg
tcctccgctggaaatgcggaatcgacaccagttagcaatggaggtcttgtttgctgcctt
cgttttcaaccgcgggtctcagattcaatgccaagactcggatgtgtacacggaggtctt
cgtaaactagaactacaccacagactcaatgttgtaacagcgattcgagtatacggaaat
taa
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integrated database retrieval system
