Varroa destructor (honeybee mite): 111254187
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Entry
111254187 CDS
T07383
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03018
RNA degradation
vde03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111254187
09123 Folding, sorting and degradation
03018 RNA degradation
111254187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vde03019
]
111254187
03041 Spliceosome [BR:
vde03041
]
111254187
Messenger RNA biogenesis [BR:
vde03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111254187
mRNA degradation factors
5'-3' decay
Lsm complex
111254187
Spliceosome [BR:
vde03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111254187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
111254187
NCBI-ProteinID:
XP_022670506
LinkDB
All DBs
Position
Unknown
AA seq
89 aa
AA seq
DB search
MSGPVTTDTVLPLELIDQCIGSRIHIIMKDDRELVGTLRGFDDYVNMVLVDVTEYETSSD
GRRVTKLDQIILNGNNITMMVPGGEIPDA
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaccagtaactacagatactgttttacctttagaactcatcgaccaatgtata
ggctcacggattcatattataatgaaggatgatcgtgaactcgttggtacgcttaggggt
tttgatgattacgtgaacatggttcttgttgacgtcaccgaatacgaaacgtcttcagat
ggccgaagggtcaccaagctcgaccagatcatcttaaatggaaataacattaccatgatg
gttcctggtggagaaattccggatgcctaa
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