Varroa destructor (honeybee mite): 111254287 Help Entry 111254287         CDS       T07383                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19719   collagen type II alpha Organism vde  Varroa destructor (honeybee mite) Pathway vde04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:vde00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     111254287  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:vde00536]     111254287 Glycosaminoglycan binding proteins [BR:vde00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    111254287 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC FnI_RECK CFC Motif Other DBs NCBI-GeneID:  111254287 NCBI-ProteinID:  XP_022670702 UniProt:  A0A7M7L5H9 LinkDB All DBs Position Unknown AA seq 1494 aa AA seqDB search MAWRVSGCHLLWLVIATAAFYTALAAPQGADEEEYAEYDEAETSLPEEHSGTVESEPGIE MCLWNGETFVDGQEWRPDLCTVCRCIAGQQVCSPQECPKLPPCRGRTIVPQGECCPICIE DPEPTSEPPPVTEEIAYVGPRGPPGEPGIPGRPGEQGTPGEPGFHGQPGLPGPPGPVPDL GKWFTEQRALSGATGEKGPVDFQYMQASVGPTGPRGPTGPPGPPGPQGFQGVRGEPGEPG PPGSTGPPGERGPAGPTGKDGEAGEDGKPGAQGPPGTQGPRGLPGLPGLPGPKGHRGYPG LDGQKGELGATGEKGSPGPQGKIGPVGPIGPAGIRGERGREGPAGPPGIRGTDGQMGPPG PPGSAGRPGPPGFPGAPGMKGDAGAQGPKGSTGLQGPRGESGRPGTPGEPGPMGPTGKDG SAGEKGARGDSGVAGVPGFPGPRGPPGLSGSPGVPGPKGAPGQPGQSGHKGESGPKGETG ATGPRGLLGPQGAPGKRGKSGAQGPPGPVGPQGERGVPGPRGLPGPDGLPGQKGEQGALG AQGPIGPKGSQGDNGKPGLPGLQGLRGTPGTPGLPGKDGALGERGLPGADGKAGEPGQQG MQGLPGPTGLPGMKGEQGEPGLDGKQGPRGPQGPRGDTGKEGPMGPAGLPGKPGEMGMRG PPGSQGARGFQGLPGVPGNPGAPGKDGIPGIAGPPGLPGATGARGERGFPGETGKQGVQG PQGDRGEPGPAGQDGARGPTGEKGAKGHQGPPGLVGLPGRRGDIGSMGPKGERGDHGPPG PEGPMGRPGEPGVQGPVGPIGHTGEPGIKGGSGPTGPIGPTGAPGQVGARGPIGPPGPIG FQGPLGPPGPTGPKGNNGAPGPKGEQGEIGPQGSPGDAGPPGPLGLSGPKGPRGEPGTKG DIGIPGLIGRPGEMGRPGEIGLPGLPGPIGLPGIKGTTGEPGRPGLQGAQGNPGPIGPQG IKGETGAEGPVGQTGPLGPPGPHGERGVPGLPGLQGPKGPMGPRGPQGERGQEGKPGGDG PPGSAGPQGIQGPPGPQGERGLIGSPGKQGPPGIAGRPGDKGPQGAAGAQGPPGPPGLIG APGPVGQRGPSGDHGEKGDTGPMGVGGPQGPRGPPGVAGLQGSKGDRGEPGDRGLKGHRG LAGLQGLPGPPGAPGERGTPGGAGTTGLPGPAGPRGAPGRDGAMGPQGVQGAPGPRGPPG ENGKPGIPGAAGPPGPPGPPGEPFGYDPAALQAILGKPHTKGPDPMIGDDARVLFDDKAS IEDKKKIIFEYYKKLVEEYDRIRNPVGTKDAPAKTCRDLSISHPDFKSGMYWIDPNEGDS RDAIQVYCDMRVGASCITPSPKIVPNKAHYIGKPKHTWFSEMPGGSQFTYKIDRVQLTFL QMLSGRAEQNITYHCKNSVAYLDATKGNYRKAVKLLSGNDLELKPHGDNVSANNKFTFTA AYDGCKDRKSSWDQTMLTFKSDKPNRLPVVDIAPKDIGGRQQQFGLEIGPACFL NT seq 4485 nt NT seq  +upstreamnt  +downstreamnt atggcgtggcgcgttagcggctgccatcttctttggctcgtgatcgccactgccgcattc tatacggctcttgccgcaccgcagggagcggatgaggaggagtacgcagagtatgatgag gccgaaacgtcgctacctgaagaacattccggcaccgtcgagtctgaaccgggtatcgaa atgtgtctctggaacggcgaaaccttcgtcgatggacaggagtggcggcccgatctgtgt accgtgtgccgttgcatagctggacaacaagtatgcagtcctcaggaatgtccgaaattg cccccgtgtagagggcgtaccattgtgccacagggcgaatgctgtcccatctgtatcgaa gatccagaacctacatcggagcctcctcctgtcacggaggaaatagcttacgttggtcca cgtggacccccgggagagcctggcatccccggacggcccggtgaacaaggaacacctgga gaacccggctttcatgggcagcctggattacctggtccgcctggtcccgttccggatctc ggcaaatggtttacagagcaacgtgcgctgtctggagccaccggagaaaaaggacccgtt gacttccagtatatgcaagcctcagtaggacccacaggccccaggggacctacgggtcca cctggtccacctgggcctcaaggctttcaaggagtgcgtggtgagccaggtgagccaggc ccaccgggatccacgggacctcccggagaaaggggtcctgcaggacctactggcaaagac ggagaagctggtgaagacggcaaacctggcgctcagggtcctcccggaactcagggccca agaggtttaccaggattaccaggacttccgggacccaaaggccatcgcggctatcctggg cttgacgggcaaaaaggagaactcggagcgacgggtgaaaagggatcacccggacctcaa ggcaaaattggaccggtcggacctattggcccagctggaattcgtggagagcgtgggcga gaaggtccggcaggtcctccaggaattcgtggcacggacggccaaatgggcccacctggt ccaccaggctcagcaggccgaccaggaccacctggttttcctggagctccaggaatgaaa ggagatgcgggagctcaaggtcctaaaggaagcactggacttcaaggaccacggggagag tctggccgaccaggaactcccggagaacctggaccaatgggtccaactggaaaggatggt tcagctggtgagaagggtgctcgcggtgattctggagtagcaggtgtacccggattccct gggccacgaggaccgccaggtttgtcaggaagtcctggcgtacctggaccgaaaggagcc cctggccagccaggccaatcaggccacaagggtgaatcaggaccaaaaggagaaacagga gcaactggcccacgaggattgctcggaccgcaaggagctcctggaaagaggggtaagagc ggtgcacaaggacctcccggacctgtagggcctcaaggtgaacgaggtgtgcctggccca aggggactcccaggtcctgacggacttcccggacaaaagggtgagcagggtgctcttgga gcgcaagggccaatcggacctaagggctctcaaggagacaatggcaagcctgggcttcct ggactccaaggccttcgaggtacaccgggtacacctggtctgcccggaaaagatggagct cttggagaaaggggccttccaggtgctgatggaaaagccggcgaacctgggcaacaggga atgcaaggccttccaggacctacagggctcccgggaatgaaaggggaacagggcgagccc ggtttagacggcaaacagggccctcgtggaccacaagggccacgtggagacactggaaag gagggtcctatgggaccggccggattaccaggaaaacctggggaaatgggaatgagaggc cccccaggatcgcaaggggctcgaggattccagggactcccgggagtccctggcaatcca ggtgcgccgggcaaagatggaattcctggaatcgctggtccacctggccttccaggagct acaggtgccaggggggagcgcggcttccctggcgagacaggcaaacagggtgtacaaggc ccacaaggtgatcgtggtgaacctgggcctgcaggacaggatggtgccagaggtccaact ggagaaaagggcgctaaaggacaccaaggccccccaggtcttgttggactccctggtcgt cgtggtgacattggatcaatgggtccaaaaggtgaacggggagaccatgggccaccaggt cctgaaggtccaatgggccggccgggagaaccaggtgtacagggtcccgtcggacctatc ggacatacaggcgagcctggcattaaaggcgggtcaggtcccactggaccgattggccca actggagctcctggacaggttggcgctagaggccctattgggcctccaggacctattgga ttccaaggtccacttggtccccctggacctactggaccaaaaggtaacaacggagcacca ggtcctaaaggtgaacaaggcgagatcggcccccagggctcccccggtgatgccggacct cctggaccccttggcctttcaggacccaagggccctcgcggggaacctggtaccaaggga gacatcggaattccaggtcttatcggtcggcctggtgagatgggaaggcccggagagatt ggattgcccggtctaccgggaccgataggccttccaggaattaagggaacaaccggtgag cctggtaggccaggtcttcaaggcgcacagggcaatcctggacctattggtcctcaaggt attaaaggtgaaaccggtgctgagggtcctgtaggtcaaaccggacctttgggtccccct ggtccacacggagagcgtggcgtaccaggtttgcccggccttcaaggtcctaaaggtcca atgggacctcgtggacctcaaggagagcgtggtcaagaaggaaagccaggaggagatgga ccaccaggatctgctggacctcaaggtatccaggggccacctggacctcagggtgaaaga ggactcattggaagccccggcaaacagggtccacctggtatcgcgggccgtcccggtgac aagggacctcaaggagcagcaggagcacagggaccgcctggaccacctggtcttattggc gccccaggacccgttggtcaaagaggcccatccggtgatcatggagaaaagggggacact ggtcccatgggtgtaggtggtccccagggacctcgtggcccgcctggagtagccggttta cagggcagtaagggagaccgcggagaacctggtgatcgtggacttaagggtcatcgaggt ctcgctggtttgcaaggacttcctggaccacctggagctccaggagagcgcggaactcct ggaggtgcaggaactaccggacttccaggaccagctggcccaagaggtgcacctggaaga gacggtgcgatgggacctcaaggagttcaaggagcaccaggccctcgagggccccctgga gaaaatggcaagcctggtattcccggagctgctggtcctcctggaccccccggacctcct ggagagccattcggatacgatcccgccgcccttcaggctattcttggtaaacctcacacg aagggcccagatccaatgatcggcgacgacgcacgcgtactattcgatgacaaagcttca attgaagataagaaaaaaatcatctttgagtattacaaaaagcttgtcgaggagtatgac cgtataagaaaccccgtcggaacgaaggatgctcctgccaaaacatgtagggatctctcg atttcccatcctgacttcaagagtggcatgtattggatagatccgaatgaaggggattcg cgcgatgctatccaggtttactgtgacatgcgtgttggggcgtcttgcattacaccttca ccgaagatcgtaccaaataaggcacactacattggcaaaccaaaacatacctggttctct gaaatgccaggcggaagtcagttcacgtacaagatcgaccgcgtacagctgacattcctg caaatgctaagcgggcgtgccgagcagaatatcacgtaccattgcaagaactcagtcgcc tacttagatgccaccaagggcaactacagaaaagcagtgaaactgctttctgggaatgat ctcgaactaaagccccatggggataacgtatctgcaaacaacaaattcaccttcactgca gcatacgatggttgcaaggatcgcaagagcagctgggatcaaactatgcttacttttaag tcggacaagcccaacaggctgccggttgtggatatcgcccccaaggacatcggaggacgt caacagcaatttggcctcgagatcggcccggcctgtttcctttag

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