Vulcanisaeta distributa: Vdis_0052
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Entry
Vdis_0052 CDS
T01313
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
vdi
Vulcanisaeta distributa
Pathway
vdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Vdis_0052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vdi03019
]
Vdis_0052
03009 Ribosome biogenesis [BR:
vdi03009
]
Vdis_0052
04131 Membrane trafficking [BR:
vdi04131
]
Vdis_0052
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vdi04147
]
Vdis_0052
Messenger RNA biogenesis [BR:
vdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Vdis_0052
Ribosome biogenesis [BR:
vdi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Vdis_0052
Membrane trafficking [BR:
vdi04131
]
SNARE
SNARE associated proteins
Others
Vdis_0052
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Vdis_0052
Exosome [BR:
vdi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Vdis_0052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_14
AAA_22
AAA_2
AAA_33
TIP49
AAA_28
IstB_IS21
AAA_lid_PRS2_C
nSTAND3
Vps4_C
Mg_chelatase
AAA_18
ABC_tran
AAA_24
RNA_helicase
DUF815
AAA_7
Sigma54_activat
PhoH
NPHP3_N
Parvo_NS1
Zeta_toxin
ATPase
UFD1_N2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ADN49467
UniProt:
E1QRU2
LinkDB
All DBs
Position
47316..49529
Genome browser
AA seq
737 aa
AA seq
DB search
MMEGSHADEWIELIVKEAKQRDAQRPIVRVDPEVMRNYGIEPGMILLIEGKRRTAAKVWY
GLPEDEGKGIIRMNAIIRKNANVEIDQKVRVKKVEAKRANTIKLAPVNMTISVDQNFVQY
TKQKLRDYVLMEGDLVQIQVLGQPLTFQVVQAKPNDAPVIIDEDTNLMIYEKPVENVNIP
RVTWEDIGDLKEAKEKIRELVELPLKHPEIFEYLGIEPPKGVLLIGPPGTGKTLLAKAVA
TETNAYFIAINGPEIVSKYYGESEAKLREIFEEAKKNAPAIIFIDEIDAIAPKREEVTGE
VEKRIVAQLLTLMDGLQERGQVIVIGATNRPEAVDPALRRPGRFDREIWINPPDTEGRYE
ILQVHTRNMPLAKDVDLRKLAEITYGYTGADIAALAREAAMRALRKALQSGILDVNKEDE
EIRKDLEKIKVTMNDFLEAMREIVPSALREIHIEIPKVRWSDIGGLEEVKQELREAIEWP
LKYPERFRKMGIKPPKGILLFGPPGTGKTLLAKAVATESNANFIAVRGPEILSKWFGESE
RAIREIFKKARMAAPCVIFFDEIDAIAPARGYAEDSPAMDRIVAQLLAEMDGVSRLDNVV
VIAATNRPDIVDPALLRPGRFDRIIYVPPPDLRARFEILKIHTKNMPLAKDVDLMELAKM
TEGYTGADIELLAREAGLLAMREVNGAGEVSMKHFIEAMKKIKPSITPEMIKFYEAWYER
MKQTLARERQRAPTLYV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgatggagggtagtcatgctgatgagtggattgaattgatagttaaggaggcgaagcag
agggatgcccagaggcccattgttagggttgatcctgaggtcatgaggaattacggcatt
gagccaggcatgatactactcattgagggtaagaggaggactgcggctaaggtttggtac
gggcttcctgaggatgagggtaagggcatcattaggatgaacgccatcattaggaagaac
gcgaatgtggagattgaccaaaaggttagggttaagaaggttgaggcgaagagggctaat
accattaagctcgcacctgtcaacatgacgataagcgttgatcagaacttcgtacaatac
acaaagcagaagcttagggattacgtactaatggagggcgacttagtgcagatacaggtg
ctcggtcaaccactaacattccaagtcgtgcaggccaaaccaaatgatgcaccagtgata
attgatgaggataccaacttgatgatttacgagaagcccgttgagaacgttaacatacca
agggttacttgggaagacattggagacttaaaggaggccaaggagaagattagggagctt
gttgagttaccgcttaagcatccagagatatttgaataccttggtattgagcctcctaag
ggcgttttactcattggtccccctggaactggtaagaccttactggctaaggcggttgcg
actgagactaatgcgtacttcatagccattaatggccccgagatagtctcgaagtattat
ggtgagtctgaggctaagttgagggagatttttgaggaggctaagaagaatgctcctgcc
attatttttattgatgagattgatgctattgctccgaagagggaggaggttacgggtgag
gtggagaagaggattgtggcgcagttattgacgctcatggatggtttgcaggaaagaggc
caggtaatcgtaataggagcaaccaacagaccagaagccgtagacccagcactaagaaga
ccaggaagattcgacagagagatctggattaatccaccggatactgagggtaggtacgaa
atactccaggtacacacgaggaacatgccacttgctaaggatgtcgacttaaggaagttg
gctgagataacctatggctataccggcgccgatattgcggccttggctagggaggctgcg
atgagagccttgaggaaggctcttcagtccggtatcctggatgttaataaggaggatgag
gagattaggaaggatcttgagaagatcaaggtcacgatgaacgacttcctcgaggccatg
agggagattgtacccagcgcactcagggagattcatatcgagattccaaaggttaggtgg
agcgatattggtggccttgaggaggttaagcaggagcttagggaggccattgagtggccg
ttgaagtacccggagaggtttaggaagatgggtattaagcctcctaagggtattttgttg
tttggtcctcctggtactggtaagactcttttggctaaggctgtggctacggagagtaat
gcgaattttattgctgttcgtggtcctgaaatactgagcaagtggttcggagaaagcgag
agagcaatcagggaaatattcaaaaaagcaagaatggcagcaccatgcgtaatattcttc
gacgaaatagacgcaatagcaccagcaaggggttatgcggaggattcacctgcaatggat
aggatagtggcgcagttgttggctgagatggatggcgtgtcgaggcttgataacgtggtt
gttatagccgcaacgaataggcccgacatcgttgacccagcactacttagaccgggcagg
ttcgataggataatttacgtgccaccgccagaccttagggctaggttcgaaatactcaag
atacataccaagaacatgccacttgctaaggatgttgacttaatggagttggcgaagatg
actgagggatacactggtgcggatattgagcttttggctagggaggcaggtttattagcc
atgagggaggtgaatggcgctggtgaggtatcaatgaagcacttcattgaggccatgaag
aagattaagccgtcaataacgcctgagatgattaagttctatgaggcctggtacgagaga
atgaagcagacgttggcgcgtgagaggcagagggcgccaacgctctatgtgtag
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integrated database retrieval system
